Sandbox Reserved 5

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*<scene name='54/545854/Ligands/1'>The secondary structure of 4QA4. </scene>
*<scene name='54/545854/Ligands/1'>The secondary structure of 4QA4. </scene>
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(<font color="pink">alpha helices are pink</font>, <font color="green">beta strands are right green</font>, <font color="yellow"> 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide (B3N) and Zinc ion (ZN) are yellow</font>, <font color="blue"> Potassium ion (K) are blue</font>, <font color="orange">Glycerol(GOL) are orange</font>).
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(<font color="pink">alpha helices are pink</font>, <font color="green">beta strands are right green</font>, <font color="yellow"> 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide (B3N) and Zinc ion (ZN) are yellow</font>, <font color="blue"> Potassium ion (K) are blue</font>, <font color="orange">Glycerol(GOL) are orange</font>right green, yellow, blue and orange colors are ligands).

Revision as of 07:02, 23 May 2015

This Sandbox is Reserved from May 10, 2015, through July 31, 2015 for use by the class Protein 3D Structure Visualization & Structural Bioinformatics taught by Eric Martz and Keiichi Namba at Osaka University, Japan. This reservation includes Sandbox Reserved 1 through Sandbox Reserved 10. Syllabus.
To get started:
  • Click the 'edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Getting Started in Proteopedia, Help:Editing, Main Help Page.


This page is about 4QA4.

Insert caption here

Drag the structure with the mouse to rotate

This protein is the Histone deacetylase.

  • The surface of 4QA4 that interacts histones. Histones are positively charged.Therefore 4QA4 (positive charges are blue, negative charges are red).


(alpha helices are pink, beta strands are right green, 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide (B3N) and Zinc ion (ZN) are yellow, Potassium ion (K) are blue, Glycerol(GOL) are orangeright green, yellow, blue and orange colors are ligands).

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