4yj3

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'''Unreleased structure'''
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==Crystal structure of tubulin bound to compound 2==
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<StructureSection load='4yj3' size='340' side='right' caption='[[4yj3]], [[Resolution|resolution]] 3.75&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4yj3]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YJ3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YJ3 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4EE:6-(4-ETHOXYPHENYL)-3-(2-METHOXYPHENYL)-7H-[1,2,4]TRIAZOLO[3,4-B][1,3,4]THIADIAZINE'>4EE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yj2|4yj2]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yj3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yj3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4yj3 RCSB], [http://www.ebi.ac.uk/pdbsum/4yj3 PDBsum]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/TBA1B_BOVIN TBA1B_BOVIN]] Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. [[http://www.uniprot.org/uniprot/STMN4_RAT STMN4_RAT]] Exhibits microtubule-destabilizing activity.<ref>PMID:15039434</ref> <ref>PMID:12111843</ref> <ref>PMID:15014504</ref> [[http://www.uniprot.org/uniprot/TBB2B_BOVIN TBB2B_BOVIN]] Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Small molecules that bind to tubulin exert powerful effects on cell division and apoptosis (programmed cell death). Cell-based high-throughput screening combined with chemo/bioinformatic and biochemical analyses recently revealed a novel compound MI-181 as a potent mitotic inhibitor with heightened activity towards melanomas. MI-181 causes tubulin depolymerization, activates the spindle assembly checkpoint arresting cells in mitosis, and induces apoptotic cell death. C2 is an unrelated compound previously shown to have lethal effects on microtubules in tumorigenic cell lines. We report 2.60 A and 3.75 A structures of MI-181 and C2, respectively, bound to a ternary complex of alphabeta-tubulin, the tubulin-binding protein stathmin, and tubulin tyrosine ligase. In the first of these structures, our crystallographic results reveal a unique binding mode for MI-181 extending unusually deep into the well-studied colchicine-binding site on beta-tubulin. In the second structure the C2 compound occupies the colchicine-binding site on beta-tubulin with two chemical moieties recapitulating contacts made by colchicine, in combination with another system of atomic contacts. These insights reveal the source of the observed effects of MI-181 and C2 on microtubules, mitosis, and cultured cancer cell lines. The structural details of the interaction between tubulin and the described compounds may guide the development of improved derivative compounds as therapeutic candidates or molecular probes to study cancer cell division. This article is protected by copyright. All rights reserved.
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The entry 4yj3 is ON HOLD until Paper Publication
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Structures of potent anticancer compounds bound to tubulin.,McNamara DE, Senese S, Yeates TO, Torres JZ Protein Sci. 2015 May 13. doi: 10.1002/pro.2704. PMID:25970265<ref>PMID:25970265</ref>
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Authors: McNamara, D.E., Torres, J.Z., Yeates, T.O.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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Description: Crystal structure of tubulin bound to compound 2
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== References ==
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[[Category: Unreleased Structures]]
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<references/>
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[[Category: Mcnamara, D.E]]
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__TOC__
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[[Category: Yeates, T.O]]
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</StructureSection>
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[[Category: Torres, J.Z]]
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[[Category: Bos taurus]]
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[[Category: McNamara, D E]]
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[[Category: Torres, J Z]]
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[[Category: Yeates, T O]]
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[[Category: Alpha-tubulin]]
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[[Category: Beta-tubulin]]
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[[Category: Cell cycle]]
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[[Category: Cell cycle inhibitor complex]]
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[[Category: Cytoskeleton]]
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[[Category: Mi-181]]
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[[Category: Microtubule]]
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[[Category: Stathmin]]

Revision as of 15:51, 27 May 2015

Crystal structure of tubulin bound to compound 2

4yj3, resolution 3.75Å

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