Ribosome 3D structures
From Proteopedia
(Difference between revisions)
Line 241: | Line 241: | ||
*Mitochondrial ribosome (mitoribosome) | *Mitochondrial ribosome (mitoribosome) | ||
+ | **[[4v19] and [[4v1a]]- 39S large subunit of the mammalian mitoribosome - pig<br /> | ||
+ | **[[5aj3]] - 28S small subunit of the mammalian mitoribosome - pig<br /> | ||
+ | **[[5aj4]] - 28S small and 39S large subunit of the mammalian mitoribosome in a 55S complex - pig<br /> | ||
**[[4ce4]]- 39S large subunit of the mammalian mitoribosome - pig<br /> | **[[4ce4]]- 39S large subunit of the mammalian mitoribosome - pig<br /> | ||
**[[3j6b]] - y54S large subunit of the mitoribosome <br /> | **[[3j6b]] - y54S large subunit of the mitoribosome <br /> | ||
**[[3j6v]] - 28S small subunit of the mammalian mitoribosome - bovine<br /> | **[[3j6v]] - 28S small subunit of the mammalian mitoribosome - bovine<br /> | ||
}} | }} |
Revision as of 16:54, 12 June 2015
Updated on 12-June-2015 For a general description of the protein see Ribosome {{#tree:id=OrganizedByTopic|openlevels=0|
- 30S subunit + RNA
- 2zm6, 1n36, 1j5e, 3oto - Tt30S ribosomal subunit+THX+16S RRNA – Thermus thermophiles
- 2vqe, 2vqf, 2uuc, 2e5l, 2uu9, 2uua, 2uub, 3pyn, 3pyq, 3pys, 3pyu - Tt30S ribosomal subunit+16S RRNA+RNA fragment
- 3kc4 - Ec30S ribosomal subunit - Escherichia coli
- 3i1m, 3i1o, 3df1, 3df3, 2vho, 2vhp, 2avy, 2aw7, 1pnx - Ec30S ribosomal subunit+16S RRNA
- 1i94, 1fka, 3uxs, 3uxt, 4dr1 - Tt30S ribosomal subunit+16S RRNA
- 4duy, 4duz, 4dv0, 4dv1, 4dv2, 4dv3, 4dv4, 4dv5, 4dv6, 4dv7 - Tt30S ribosomal subunit+16S RRNA (mutant)
- 4dr4, 4b3m, 4b3r, 4b3s, 4b3t - Tt30S ribosomal subunit+16S RRNA + mRNA
- 1p87 - Ec30S ribosomal subunit+16S RRNA – Cryo-EM
- 3bbn - 30S ribosomal subunit+16S RRNA – Cryo-EM – spinach
- 2zm6, 1n36, 1j5e, 3oto - Tt30S ribosomal subunit+THX+16S RRNA – Thermus thermophiles
- 30S subunit + chain release factor
- 3mr8, 3ms0 – Tt30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+mRNA+16S RRNA
- 3d5a 3d5c - Tt30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+E-site tRNA+mRNA +16S RRNA
- 3zvo - Tt30S ribosomal subunit+THX+P-site tRNA Met +mRNA +16S RRNA+chain release factor 3
- 2b64 - Tt30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 1
- 2b9m - Tt30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 2
- 2x9r, 2x9t, 2wh1, 2wh3 - Tt30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+mRNA +16S RRNA
- 3f1e, 3f1g - Tt30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+E-site tRNA +16S RRNA
- 4kfh, 4kfk - Tt30S ribosomal subunit+16S RRNA+ RF-2 + mRNA+ P-site tRNA fMet
- 3mr8, 3ms0 – Tt30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+mRNA+16S RRNA
- 30S subunit +tRNA+mRNA
- 2hgi - Tt30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet
- 4l6k, 4l6m - Tt30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA
- 2hgp - Tt30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA
- 3t1h, 3t1y - Tt30S ribosomal subunit+16S RRNA+tRNA Lys +mRNA
- 3tvf, 3tvg, 3uyd, 3uyf - Tt30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA
- 3zn7, 3znd - Tt30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA
- 3uz6, 3uz7, 3uzg, 3uzi - Tt30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA
- 2i2p, 2i2u - Ec30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA
- 2hgr, 3v6u, 3v6v, 4ej9, 4eja - Tt30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA
- 1yl4 – Tt30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator
- 1pns - Ec30S ribosomal subunit+ tRNA Phe+16S RRNA+mRNA
- 3j13 - Ec30S ribosomal subunit+ P-site tRNA +16S RRNA+mRNA – Cryo-EM
- 3j0u, 3j0v, 3j0x, 3j0z, 3j10, 3j20 - Ec30S ribosomal subunit+ A-site tRNA + P-site tRNA +16S RRNA+mRNA – Cryo-EM
- 1xnq, 1xnr - Tt30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S RRNA
- 4gkj, 4gkk - Tt30S ribosomal subunit +16S RRNA +THX + mRNA + tRNA Met
- 4jv5, 4jya, 4k0k, 4k0l - Tt30S ribosomal subunit +16S RRNA +THX + mRNA + ASL-tRNA
- 2hgi - Tt30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet
- 30S subunit +A-site tRNA
- 2uxd, 2uxc - Tt30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S RRNA
- 1n32, 1n33 - Tt30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S RRNA
- 1n34 - Tt30S ribosomal subunit+THX+A-site mRNA fragment +16S RRNA
- 1xmo, 1xmq - Tt30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S RRNA
- 2uxb - Tt30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S RRNA
- 2uxd, 2uxc - Tt30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S RRNA
- 30S subunit+P-site tRNA
- 3i8g - Tt30S ribosomal subunit+P-site tRNA+mRNA +16S RRNA
- 3i8h, 3i9b, 3i9d - Tt30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA
- 1ibk - Tt30S ribosomal subunit+THX+P-site mRNA fragment +16S RRNA
- 2wwl - Ec30S ribosomal subunit+Poly-Ala chain+P-site tRNA+mRNA +16S RRNA
- 3i1q - Ec30S ribosomal subunit+P-site tRNA hairpin+mRNA
- 3i1s, 3i1z, 3i21 - Ec30S ribosomal subunit+P-site tRNA hairpin+mRNA +16S RNA
- 2om7 – TtRPS2+TtRPS12+TtRPL1+ P-site tRNA+16S RRNA fragment+23S RRNA fragment
- 3i8g - Tt30S ribosomal subunit+P-site tRNA+mRNA +16S RRNA
- 30S subunit+A-site tRNA+P-site tRNA
- 30S subunit+P-site tRNA+E-site tRNA
- 2ow8 - Tt30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA+mRNA +16S RRNA
- 2b9o - Tt30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA
- 2qnh - Tt30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA
- 2wdg, 2wdh, 2wdk, 2wdm - Tt30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA+tRNA Phe
- 2ow8 - Tt30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA+mRNA +16S RRNA
- 30S subunit+A-site tRNA+P-site tRNA+E-site tRNA
- 30S subunit + antibiotics
- 1i95, 1i97, 2hhh, 2f4v, 3oge, 3ogy, 3ohc, 3ohd, 3ohy, 3oi0, 3oi2, 3oi4, 4dr3 - Tt30S ribosomal subunit+16S RRNA+antibiotic
- 1hnx, 1hnw, 1hnz, 1fjg, 4aqy, 4dr5, 4dr6, 4dr7, 4khp - Tt30S ribosomal subunit+16S RRNA+mRNA fragment+antibiotic
- 2qbb, 2qb9, 1vs5, 1vs7 , 2qan, 2qal, 2qou, 2qow, 2qoy, 2qp0, 2z4k, 2z4m, 3oaq, 3oar, 3ofa, 3ofb, 3ofo, 3ofp, 3ofx, 3ofy, 3or9, 3ora - Ec30S ribosomal subunit+16S RRNA+antibiotic
- 4gaq, 4gas - Ec30S ribosomal subunit+16S RRNA+ mRNA + antibiotic
- 3sfs - Ec30S ribosomal subunit+16S RRNA+ mRNA + RF-3 + antibiotic
- 2j00, 2j02 - Tt30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA
- 3knl, 3knm, 3knn, 3kno, 3knj, 3knh - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+ antibiotic
- 3uz3, 3uz4 - Tt30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA + paromomycin
- 4g5k, 4g5m, 4g5t, 4g5v - Tt30S ribosomal subunit+16S RRNA + tRNA fMet + mRNA + antibiotics
- 3uzl, 3uzm - Tt30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA + paromomycin
- 1i95, 1i97, 2hhh, 2f4v, 3oge, 3ogy, 3ohc, 3ohd, 3ohy, 3oi0, 3oi2, 3oi4, 4dr3 - Tt30S ribosomal subunit+16S RRNA+antibiotic
- 30S subunit + ribosome recycling factor
- 2qbd, 2qbf -Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor
- 3r8n, 3r8o, 4gd1, 4gd2 - Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor + mRNA + tRNA
- 2qbh, 2qbj - Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor+gentamicin
- 2v46, 2v48 - Tt30S ribosomal subunit+16S RRNA+ribosome recycling factor+P-site tRNA Phe+mRNA+tRNA fMet
- 2qbd, 2qbf -Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor
- 30S subunit + elongation factor
- 2wri, 2wrk - Tt30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA+elongation factor G
- 2wrn, 2wrq - Tt30S ribosomal subunit+THX+A-site tRNA+mRNA +16S RRNA+elongation factor TU-4
- 3fic - Tt30S ribosomal subunit+THX+A-site tRNA+P-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU-A
- 4abr - Tt30S ribosomal subunit+THX + E/P-site tRNA fMet +mRNA codon+16S RRNA+elongation factor TU
- 2y0u, 2y0w, 2y0y, 2y12, 2y10, 2y18, 2y14, 2y16 - Tt30S ribosomal subunit+THX+A-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU
- 3fih - Ec30S ribosomal subunit+A-site tRNA Phe+P-site tRNA+mRNA +16S RRNA+elongation factor TU
- 3izv - Ec30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+elongation factor TU
- 3j18 - Ec30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+ mRNA + SSRA-binding protein + formyl-Met specific initiator tRNA + elongation factor G – Cryo-EM
- 3izw - Ec30S ribosomal subunit+A-site tRNA Phe +mRNA +16S RRNA+elongation factor TU
- 3huw, 3huy - Tt30S ribosomal subunit+THX+tRNA-Met+mRNA +16S RRNA+elongation factor P
- 4b8f, 4b8h - Tt30S ribosomal subunit+THX+RNA+mRNA +16S RRNA+elongation factor G
- 4btc, 4kdg, 4kdj - Tt30S ribosomal subunit+THX+RNA +16S RRNA+elongation factor G
- 4juw - Tt30S ribosomal subunit+THX+ tRNA Phe +16S RRNA + mRNA +elongation factor G
- 4kbt, 4kbv, 4kcy, 4kd0, 4kd8, 4kda - Tt30S ribosomal subunit+THX+ tRNA Met +16S RRNA + mRNA + viomycin + elongation factor G
- 4kiy, 4kj0, 4kj2, 4kj4, 4kj6, 4kj8, 4kja, 4kjc - Ec30S ribosomal subunit +16S RRNA + viomycin + elongation factor G
- 2wri, 2wrk - Tt30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA+elongation factor G
- 30S subunit + translation initiation factor
- 30S subunit + various proteins
- 3kiq, 3kis, 3kiu, 3kix - Tt30S ribosomal subunit+toxin RelE+16S RRNA
- 2xfz, 2xg1 - Tt30S ribosomal subunit+colicin-E3 fragment+16S RRNA+mRNA+E-site tRNA+THX
- 1voq, 1vos , 1vov, 1vox, 1voz - Ec30S ribosomal subunit+protein Y+16S RRNA
- 3j36 - Ec30S ribosomal subunit+ tetracycline resistance protein +16S RRNA + mRNA + P-tRNA – Cryo-EM
- 1x18 – TtRPS2+TtRPS7+TtRPS11+TtRPS18+GTP-binding protein ERA+RNA fragments
- 4dh9, 4dhb - Tt30S ribosomal subunit +16S RRNA+mRNA+P-site tRNA fMet +THX + YAEJ
- 3v22, 3v24, 3v26, 3v28 - Tt30S ribosomal subunit +16S RRNA +THX + modulation factor
- 3v2c, 3v2e - Tt30S ribosomal subunit +16S RRNA +THX + ribosome-associated inhibitor
- 3j00 – EcRPS2 + 16S RRNA + FTSQ + apolipoprotein A-I
- 2ykr - EcRPS2 + 16S RRNA + GMPPNP + GTPase RSGA
- 4a2i - EcRPS2 + 16S RRNA + GTPase RSGA – Cryo EM
- 3uoq - EcRPS2 + 16S RRNA + mRNA + peptide chain release factor
- 4adv - EcRPS2 + 16S RRNA + methyltransferase – Cryo EM
- 3kiq, 3kis, 3kiu, 3kix - Tt30S ribosomal subunit+toxin RelE+16S RRNA
- 40S ribosomal subunit
- 3jyv - Tl40S ribosomal subunit+RACK1+S19E+P-site tRNA – Thermomyces lanuginosus
- 2xzm, 2xzn - Tet40S ribosomal subunit+RACK1 – Tetrahymena thermophila
- 1s1h - y40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast
- 3izb - y40S ribosomal subunit+ RACK1 – Cryo-EM
- 3o2z, 3o30 - y40S ribosomal subunit+ RACK1
- 3u5c, 3u5g - y40S ribosomal subunit+ RACK1 + suppressor protein SMT1
- 3iz6 - w40S ribosomal subunit+RACK1 – wheat
- 3j38 - Dm40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – Drosophila melanogaster – Cryo-EM
- 3j3a - h40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – human – Cryo-EM
- 4kzx - r40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM
- 4kzy - r40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM
- 4kzz - r40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM
- 2zkq – d40S ribosomal subunit+RACK1+RRNA fragment – dog - Cryo-EM
- 3zey - Tb40S ribosomal subunit – Trypanosoma brucei – Cryo-EM
- 4bpe, 4bpn, 4bpo, 4bpp - r40S ribosomal subunit+ 18SRRNA + EIF1 + EIF1A
- 3jyv - Tl40S ribosomal subunit+RACK1+S19E+P-site tRNA – Thermomyces lanuginosus
- 50S subunit+RNA
- 2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 3hux, 3huz, 2wdi, 2wdj 2wdl 1vsp, 2v47 , 2v49, 1vsa, 3pyo, 3pyr, 3pyt, 3pyv, 3v6w, 3v6x, 3zne, 4btd, 4ejb, 4ejc, 4k0m, 4k0q, 2wrj, 2wrl, 2wro, 2wrr, 2wh2, 2wh4, 2hgj, 2hgq, 2hgu,2j01, 2j03, 1yl3, 3i8i, 3f1f, 3f1h, 2b66, 2b9n, 2b9p, 1giy, 2xqe, 2y0v, 2y0x, 2y0z, 2y11, 2y13, 2y15, 2y17, 2y19, 3zvp, 4abs, 4b8g, 4b8i, 4jux, 4kbu, 4kbw, 4kcz, 4kd2, 4kd9, 4kdb, 4kdh, 4kdk, 4kfi, 4kfl - Tt50S subunit+5S RRNA+23S RRNA
- 2xg0, 2xg2, 3kir, 3kit, 3kiw, 3kiy – Tt50S subunit+RNA fragments
- 3fin, 2xtg, 2xux - Tt50S subunit+5S RRNA+23S RRNA – Cryo-EM
- 2wwq – Ec50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA
- 3i1n, 3i1p, 3i1r, 3i1t, 3i20, 3i22, 3e1b, 3e1d, 3df2, 3df4, 2vhn, 2qov, 2qox, 2i2t, 2i2v, 1vs6, 1vs8, 2aw4, 2awb, 3ofd, 3og0, 3oas, 3oat, 3uos, 3r8s, 3r8t, 3j37, 4kix, 4kiz, 4kj1, 4kj3, 4kj5, 4kj7, 4kj9, 4kjb - Ec50S subunit+5S RRNA+23S RRNA
- 3fik, 2gya, 2gyc, 1p85, 1p86, 3izt, 3izu, 3j0t, 3j0w, 3j0y, 3j11, 3j12, 3j14, 3j19 - Ec50S subunit+5S RRNA+23S RRNA – Cryo-EM
- 3kcr - Ec50S subunit+5S RRNA+23S RRNA+preprotein translocase
- 3bbo - s50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM
- 2zjq, 2zjr, 1nkw - Dr50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans
- 4hub,4i4m,2qa4, 3cc2, 1s72, 1kqs, 1qvg, 1jj2, 1ffk - Hm 50S subunit+5S RRNA+23S RRNA –Haloarcula marismortui
- 3cc7, 3cce, 3ccj, 3ccl, 3ccm, 3ccq, 3ccr, 3ccs, 3ccu, 3ccv - Hm 50S subunit+5S RRNA+23S RRNA (mutant)
- 1yj9 - Hm50S subunit (mutant)+5S RRNA+23S RRNA
- 1qvf- Hm50S subunit+5S RRNA+23S RRNA + deacylated tRNA minihelix
- 1q86 - Hm50S subunit+5S RRNA+23S RRNA+CCA-Phe-caproic acid-biotin
- 3cma, 3cme, 1vq8, 1vq9, 1m90 - Hm50S subunit+5S RRNA+23S RRNA+CCA+CCA-Phe-CAP-BIO
- 1vq4, 1vq5, 1vq7, 1vql, 1vqm, 1vqp – Hm50S subunit+5S RRNA+23S RRNA+transition state analog
- 1vq6, 1vqk, 1vqn – Hm50S subunit+5S RRNA+23S RRNA+ c-hpmn+CCA-Phe-caproic acid-biotin
- 1vqo – Hm50S subunit+5S RRNA+23S RRNA+ CCPMN
- 3iy9 – 50S subunit – Leishmania taretolae
- 2ftc – 50S subunit+5S RRNA+23S RRNA – bovine - Cryo_EM
- 3j21 – 50S subunit + P0 + LX – Pyrococcus furiosus – Cryo EM
- 3j3v, 3j3w - 50S subunit+5S RRNA+23S RRNA – Bacillus subtilis
- 2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 3hux, 3huz, 2wdi, 2wdj 2wdl 1vsp, 2v47 , 2v49, 1vsa, 3pyo, 3pyr, 3pyt, 3pyv, 3v6w, 3v6x, 3zne, 4btd, 4ejb, 4ejc, 4k0m, 4k0q, 2wrj, 2wrl, 2wro, 2wrr, 2wh2, 2wh4, 2hgj, 2hgq, 2hgu,2j01, 2j03, 1yl3, 3i8i, 3f1f, 3f1h, 2b66, 2b9n, 2b9p, 1giy, 2xqe, 2y0v, 2y0x, 2y0z, 2y11, 2y13, 2y15, 2y17, 2y19, 3zvp, 4abs, 4b8g, 4b8i, 4jux, 4kbu, 4kbw, 4kcz, 4kd2, 4kd9, 4kdb, 4kdh, 4kdk, 4kfi, 4kfl - Tt50S subunit+5S RRNA+23S RRNA
- 50S subunit + antibiotics
- 3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip - Dr50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+ antibiotic
- 4io9, 4ioa, 4ioc - Dr50S subunit+5S RRNA+23S RRNA+ antibiotics
- 2qba, 2qbc, 4gar, 4gau, 2qam, 2qao, 2qoz, 2qp1, 3ofc, 3ofz, 3ofq, 3ofr, 1vt2, 3orb, 4l6j, 4l6l - Ec50S subunit+5S RRNA+23S RRNA+ antibiotics
- 3i55 3i56, 3g4s, 3g4e, 3g71, 2qex, 3cc4, 3cd6, 1yhq, 1yi2, 1yij, 1yjn, 1yjw, 2otj, 2otl, 1yit, 1k73, 1kc8, 1k8a, 1k9m, 1kd1, 1m1k, 3cpw, 1yit, 1q7y, 1q81, 1q82, 1n8r, 1nji, 3cxc - Hm50S subunit+5S RRNA+23S RRNA + antibiotics
- 3oh5, 3oh7, 3ohj, 3ohk, 3ohz, 3oi1, 3oi3, 3oi5 - Tt50S subunit+5S RRNA+23S RRNA+antibiotic
- 3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip - Dr50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+ antibiotic
- 60S subunit
- 3jyw - 60S subunit – Thermomyces lanuginosus – Cryo-EM
- 1s1i, 1s1h - y60S ribosomal subunit+ 5.8S RRNA+ 5S RRNA – Cryo-EM
- 3izs - y60S subunit – Cryo-EM
- 3u5e, 3u5i - y60S subunit
- 3o58, 3o5h - y60S ribosomal subunit+ 5.8S RRNA+ 5S RRNA + 25S RRNA
- 3izr, 3izt, 3izu, 3izs - w60S subunit
- 3j39 – Dm60S subunit – Cryo-EM
- 3j3b – h60S subunit – Cryo-EM
- 4a17, 4a1a, 4a1c, 4a1e - Tet60S ribosomal subunit + 5S RRNA + 5.8S RRNA
- 3zf7 - Tb60S subunit - Cryo EM
- 3jyw - 60S subunit – Thermomyces lanuginosus – Cryo-EM
- large + small ribosomal subunit
- 1ml5 - Ec50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – Cryo-EM
- 2qan, 2qal, 2qou, 2qow, 2qoy, 2qp0 - Ec50S ribosomal subunit+30S ribosomal subunit
- 2zkr - d60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – dog - Cryo-EM
- 3j0l - r60S ribosomal subunit+40S ribosomal subunit+RRNA fragments+ mRNA fragments – rabbit - Cryo-EM
- 3j0o, 3j0p, 3j0q - r60S ribosomal subunit+40S ribosomal subunit+RRNA fragments+ mRNA fragments + tRNA – Cryo-EM
- 3u5b, 3u5c, 3u5d, 3u5e, 3u5f, 3u5g, 3u5h, 3u5i, 4v88 - y60S ribosomal subunit+40S ribosomal subunit
- 1vxu, 1vxv, 1vxw, 3j77, 3j78 - y60S ribosomal subunit+40S ribosomal subunit - rotated ribosome with 1 tRNA
- 4u3m, 4u56, 4u3n, 4u55, 4u3u, 4u53, 4u4n, 4u4o, 4u4q, 4u4r, 4u4u, 4u52, 4u51, 4u4y, 4u4z, 4u6f, 4u50 - y60S ribosomal subunit+40S ribosomal subunit in complexes with 12 eukaryote-specific and 4 broad-spectrum inhibitors
- 1ml5 - Ec50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – Cryo-EM
- 50S subunit + ribosome releasing factor (RRF)
- 50S subunit + various proteins
- 2vhm - Ec50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
- 2j28 - Ec50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM
- 1vor, 1vou, 1vow, 1voy, 1vp0, 1pnu, 1pny - Ec50S subunit+5S RRNA+23S RRNA+general stress protein Ctc
- 3j01 - Ec50S subunit+5S RRNA+23S RRNA + SECYE – Cryo-EM
- 1w2b - Hm50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
- 2vhm - Ec50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
- 60S subunit + various proteins
- 4a18, 4a19, 4a1b, 4a1d - Tet60S subunit+ 26S RRNA+ translation initiation factor 6
- 3izs – y60S subunit + P0 + P1 + P2 - Cryo EM
- 3u5i – y60S subunit + P0
- 4b6a – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM
- 3o5h – y60S subunit + 5S RRNA + 5.8S RRNA + 25S RRNA + P0
- 3j39 – Dm60S subunit + P0 - Cryo EM
- 3j3b – h60S subunit + P0 + P1 + P2 – human - Cryo EM
- 2lbf – hP1 dimerization domain + P2 dimerization domain - NMR
- 2w1o – hP2 dimerization domain - NMR
- 4beh – hP1 + P2 - NMR
- 4a18, 4a19, 4a1b, 4a1d - Tet60S subunit+ 26S RRNA+ translation initiation factor 6
- Mitochondrial ribosome (mitoribosome)
- [[4v19] and 4v1a- 39S large subunit of the mammalian mitoribosome - pig
- 5aj3 - 28S small subunit of the mammalian mitoribosome - pig
- 5aj4 - 28S small and 39S large subunit of the mammalian mitoribosome in a 55S complex - pig
- 4ce4- 39S large subunit of the mammalian mitoribosome - pig
- 3j6b - y54S large subunit of the mitoribosome
- 3j6v - 28S small subunit of the mammalian mitoribosome - bovine
- [[4v19] and 4v1a- 39S large subunit of the mammalian mitoribosome - pig
}}
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Wayne Decatur, Joel L. Sussman, Jaime Prilusky, Alexander Berchansky