This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3c1t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="3c1t" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c1t, resolution 2.252&Aring;" /> '''Binding of two subs...)
Line 1: Line 1:
-
[[Image:3c1t.jpg|left|200px]]<br /><applet load="3c1t" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:3c1t.jpg|left|200px]]
-
caption="3c1t, resolution 2.252&Aring;" />
+
 
-
'''Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site'''<br />
+
{{Structure
 +
|PDB= 3c1t |SIZE=350|CAPTION= <scene name='initialview01'>3c1t</scene>, resolution 2.252&Aring;
 +
|SITE= <scene name='pdbsite=AC1:Nap+Binding+Site+For+Residue+A+340'>AC1</scene>, <scene name='pdbsite=AC2:Myc+Binding+Site+For+Residue+A+341'>AC2</scene>, <scene name='pdbsite=AC3:Myc+Binding+Site+For+Residue+A+342'>AC3</scene>, <scene name='pdbsite=AC4:Nap+Binding+Site+For+Residue+B+340'>AC4</scene>, <scene name='pdbsite=AC5:Myc+Binding+Site+For+Residue+B+341'>AC5</scene>, <scene name='pdbsite=AC6:Myc+Binding+Site+For+Residue+B+342'>AC6</scene>, <scene name='pdbsite=AC7:Nap+Binding+Site+For+Residue+C+340'>AC7</scene>, <scene name='pdbsite=AC8:Myc+Binding+Site+For+Residue+C+341'>AC8</scene>, <scene name='pdbsite=AC9:Myc+Binding+Site+For+Residue+C+342'>AC9</scene>, <scene name='pdbsite=BC1:Nap+Binding+Site+For+Residue+D+340'>BC1</scene>, <scene name='pdbsite=BC2:Myc+Binding+Site+For+Residue+D+341'>BC2</scene> and <scene name='pdbsite=BC3:Myc+Binding+Site+For+Residue+D+342'>BC3</scene>
 +
|LIGAND= <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene> and <scene name='pdbligand=MYC:3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE'>MYC</scene>
 +
|ACTIVITY= [http://en.wikipedia.org/wiki/Dihydrokaempferol_4-reductase Dihydrokaempferol 4-reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.219 1.1.1.219]
 +
|GENE= DFR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Vitis vinifera])
 +
}}
 +
 
 +
'''Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site'''
 +
 
==About this Structure==
==About this Structure==
-
3C1T is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vitis_vinifera Vitis vinifera] with <scene name='pdbligand=NAP:'>NAP</scene> and <scene name='pdbligand=MYC:'>MYC</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Dihydrokaempferol_4-reductase Dihydrokaempferol 4-reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.219 1.1.1.219] Known structural/functional Sites: <scene name='pdbsite=AC1:Nap+Binding+Site+For+Residue+A+340'>AC1</scene>, <scene name='pdbsite=AC2:Myc+Binding+Site+For+Residue+A+341'>AC2</scene>, <scene name='pdbsite=AC3:Myc+Binding+Site+For+Residue+A+342'>AC3</scene>, <scene name='pdbsite=AC4:Nap+Binding+Site+For+Residue+B+340'>AC4</scene>, <scene name='pdbsite=AC5:Myc+Binding+Site+For+Residue+B+341'>AC5</scene>, <scene name='pdbsite=AC6:Myc+Binding+Site+For+Residue+B+342'>AC6</scene>, <scene name='pdbsite=AC7:Nap+Binding+Site+For+Residue+C+340'>AC7</scene>, <scene name='pdbsite=AC8:Myc+Binding+Site+For+Residue+C+341'>AC8</scene>, <scene name='pdbsite=AC9:Myc+Binding+Site+For+Residue+C+342'>AC9</scene>, <scene name='pdbsite=BC1:Nap+Binding+Site+For+Residue+D+340'>BC1</scene>, <scene name='pdbsite=BC2:Myc+Binding+Site+For+Residue+D+341'>BC2</scene> and <scene name='pdbsite=BC3:Myc+Binding+Site+For+Residue+D+342'>BC3</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C1T OCA].
+
3C1T is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vitis_vinifera Vitis vinifera]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C1T OCA].
[[Category: Dihydrokaempferol 4-reductase]]
[[Category: Dihydrokaempferol 4-reductase]]
[[Category: Single protein]]
[[Category: Single protein]]
Line 16: Line 25:
[[Category: MYC]]
[[Category: MYC]]
[[Category: NAP]]
[[Category: NAP]]
-
[[Category: flavonoids]]
+
[[Category: flavonoid]]
[[Category: oxidoreductase]]
[[Category: oxidoreductase]]
[[Category: rossmann fold]]
[[Category: rossmann fold]]
[[Category: short chain dehydrogenase reductase]]
[[Category: short chain dehydrogenase reductase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:08:13 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:02:13 2008''

Revision as of 17:02, 20 March 2008

Image:3c1t.jpg


PDB ID 3c1t

Drag the structure with the mouse to rotate
, resolution 2.252Å
Sites: , , , , , , , , , , and
Ligands: and
Gene: DFR1 (Vitis vinifera)
Activity: Dihydrokaempferol 4-reductase, with EC number 1.1.1.219
Coordinates: save as pdb, mmCIF, xml



Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site


About this Structure

3C1T is a Single protein structure of sequence from Vitis vinifera. Full crystallographic information is available from OCA.

Page seeded by OCA on Thu Mar 20 19:02:13 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3c1t"
Personal tools