User:Rana Saad/The human GABAb receptor

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'''Common subunit-subunit interactions'''
'''Common subunit-subunit interactions'''
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In both the resting (apo form, PDB 4mqe) and active states (The GABA<sub>B</sub> agonist-bound structures), GBR1bVFT and GBR2VFT interact through their LB1 domains. In the apo and antagonist-bound (inactive state) structures, the subunit association is exclusively facilitated by this LB1-LB1 contact. The heterodimer buries over 1,400 Å2 of solvent accessible surface area and exhibits exceptionally high interfacial shape correlation. <scene name='70/701448/Lb1_lb1_interaction/1'>The LB1-LB1 interaction is mediated by the B and C helices of both subunits.</scene>
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In both the resting (apo form, PDB 4mqe) and active states (the GABA<sub>B</sub> agonist-bound structures), GBR1bVFT and GBR2VFT interact through their LB1 domains. In the apo and antagonist-bound (inactive state) structures, the subunit association is exclusively facilitated by this LB1-LB1 contact. The heterodimer buries over 1,400 Å2 of solvent accessible surface area and exhibits exceptionally high interfacial shape correlation. <scene name='70/701448/Lb1_lb1_interaction/1'>The LB1-LB1 interaction is mediated by the B and C helices of both subunits.</scene>
===='''''Agonist and antagonist binding'''''====
===='''''Agonist and antagonist binding'''''====
All of the [http://en.wikipedia.org/wiki/Agonist agonists] and [http://en.wikipedia.org/wiki/Receptor_antagonist antagonists] bind the '''extracellular VFT module situated at the crevice between the LB1 and LB2 domains of the GBR1 subunit'''.
All of the [http://en.wikipedia.org/wiki/Agonist agonists] and [http://en.wikipedia.org/wiki/Receptor_antagonist antagonists] bind the '''extracellular VFT module situated at the crevice between the LB1 and LB2 domains of the GBR1 subunit'''.
The agonist binding induces the formation of an additional heterodimer interface between the
The agonist binding induces the formation of an additional heterodimer interface between the
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LB2 domains of GBR1bVFT and GBR2VFT subunits. The LB2-LB2 interface buries over
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LB2 domains of GBR1bVFT and GBR2VFT subunits. The LB2-LB2 interface buries over 1,300 Å2 of solvent accessible surface area, has poor shape complementarity, and is dominated by polar interactions.
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1,300 Å2 of solvent accessible surface area, has poor shape complementarity, and is
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dominated by polar interactions.
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The LB2-LB2 interaction is mediated by .<scene name='70/701448/Lb2-lb2_interaction/3'>two strand-loop-helix motifs from each LB2
The LB2-LB2 interaction is mediated by .<scene name='70/701448/Lb2-lb2_interaction/3'>two strand-loop-helix motifs from each LB2
domain. The neighboring strands f and g are part of the central β-sheet in LB2, and
domain. The neighboring strands f and g are part of the central β-sheet in LB2, and

Revision as of 18:40, 25 July 2015

GABAb receptor

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Rana Saad

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