4xoj
From Proteopedia
(Difference between revisions)
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| - | ''' | + | ==Structure of bovine trypsin in complex with analogues of sunflower inhibitor 1 (SFTI-1)== |
| + | <StructureSection load='4xoj' size='340' side='right' caption='[[4xoj]], [[Resolution|resolution]] 0.91Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4xoj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XOJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XOJ FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xoj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xoj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4xoj RCSB], [http://www.ebi.ac.uk/pdbsum/4xoj PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/SFTI1_HELAN SFTI1_HELAN]] Inhibits trypsin, cathepsin G, elastase, chymotrypsin and thrombin. Does not inhibit factor Xa.<ref>PMID:10390350</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Serine proteinase catalyzed peptide splicing was demonstrated in both, one and two-peptide-chain (C- and N-terminal peptide chains linked by a disulfide bridge) trypsin inhibitor SFTI-1 analogues. In the second series, peptide splicing, with catalytic amount of proteinase, was observed only when formation of acyl-enzyme intermediate was preceded by the hydrolysis of the substrate Lys-Ser peptide bond. Here we presented that at an equimolar amount of the proteinase, splicing occurred in all two-peptide-chain analogues. This conclusion was supported by high resolution crystal structures of selected analogues in complex with trypsin. We showed that the process followed a direct transpeptidation mechanism. It means that the acyl-enzyme intermediate was formed and was immediately utilized for a new peptide bond formation, and products associated with the hydrolysis of acyl-enzyme were not observed. The demonstrated peptide splicing was a sequence- not structure-specific. | ||
| - | + | Investigation of serine proteinase catalyzed peptide splicing in analogues of sunflower trypsin inhibitor 1 (SFTI-1).,Karna N, Malicki S, Debowski D, Golik P, Gitlin A, Grudnik P, Wladyka B, Brzozowski K, Dubin G, Rolka K, Legowska A Chembiochem. 2015 Jul 25. doi: 10.1002/cbic.201500296. PMID:26212347<ref>PMID:26212347</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | == References == | |
| - | + | <references/> | |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| + | [[Category: Bos taurus]] | ||
| + | [[Category: Trypsin]] | ||
[[Category: Brzozowski, K]] | [[Category: Brzozowski, K]] | ||
| - | [[Category: Karna, N]] | ||
[[Category: Debowski, D]] | [[Category: Debowski, D]] | ||
| - | [[Category: Rolka, K]] | ||
[[Category: Dubin, G]] | [[Category: Dubin, G]] | ||
| + | [[Category: Gitlin, A]] | ||
| + | [[Category: Golik, P]] | ||
| + | [[Category: Grudnik, P]] | ||
| + | [[Category: Karna, N]] | ||
[[Category: Legowska, A]] | [[Category: Legowska, A]] | ||
| + | [[Category: Malicki, S]] | ||
| + | [[Category: Rolka, K]] | ||
[[Category: Wladyka, B]] | [[Category: Wladyka, B]] | ||
| - | [[Category: | + | [[Category: Hydrolase]] |
| - | [[Category: | + | [[Category: Inhibitor]] |
| + | [[Category: Protease]] | ||
| + | [[Category: Sfti]] | ||
| + | [[Category: Splicing]] | ||
Revision as of 14:37, 12 August 2015
Structure of bovine trypsin in complex with analogues of sunflower inhibitor 1 (SFTI-1)
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Categories: Bos taurus | Trypsin | Brzozowski, K | Debowski, D | Dubin, G | Gitlin, A | Golik, P | Grudnik, P | Karna, N | Legowska, A | Malicki, S | Rolka, K | Wladyka, B | Hydrolase | Inhibitor | Protease | Sfti | Splicing
