4wpg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
+
==Group A Streptococcus GacA is an essential dTDP-4-dehydrorhamnose reductase (RmlD)==
 +
<StructureSection load='4wpg' size='340' side='right' caption='[[4wpg]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4wpg]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WPG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WPG FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/dTDP-4-dehydrorhamnose_reductase dTDP-4-dehydrorhamnose reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.133 1.1.1.133] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wpg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wpg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4wpg RCSB], [http://www.ebi.ac.uk/pdbsum/4wpg PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The sugar nucleotide dTDP-L-rhamnose is critical for the biosynthesis of the Group A Carbohydrate, the molecular signature and virulence determinant of the human pathogen Group A Streptococcus (GAS). The final step of the four-step dTDP-L-rhamnose biosynthesis pathway is catalyzed by dTDP-4-dehydrorhamnose reductases (RmlD). RmlD from the Gram-negative bacterium Salmonella is the only structurally characterized family member and requires metal-dependent homo-dimerization for enzymatic activity. Using a biochemical and structural biology approach, we demonstrate that the only RmlD homologue from GAS, previously renamed GacA, functions in a novel monomeric manner. Sequence analysis of 213 Gram-negative and Gram-positive RmlD homologues predicts that enzymes from all Gram-positive species lack a dimerization motif and function as monomers. The enzymatic function of GacA was confirmed through heterologous expression of gacA in a S. mutans rmlD knockout, which restored attenuated growth and aberrant cell division. Finally, analysis of a saturated mutant GAS library using Tn-sequencing and generation of a conditional-expression mutant identified gacA as an essential gene for GAS. In conclusion, GacA is an essential monomeric enzyme in GAS and representative of monomeric RmlD enzymes in Gram-positive bacteria and a subset of Gram-negative bacteria. These results will help future screens for novel inhibitors of dTDP-L-rhamnose biosynthesis.
-
The entry 4wpg is ON HOLD
+
GacA is Essential for Group A Streptococcus and Defines a New Class of Monomeric dTDP-4-dehydrorhamnose Reductases (RmlD).,van der Beek SL, Le Breton Y, Ferenbach AT, Chapman RN, van Aalten DM, Navratilova I, Boons GJ, McIver K, van Sorge NM, Dorfmueller HC Mol Microbiol. 2015 Aug 17. doi: 10.1111/mmi.13169. PMID:26278404<ref>PMID:26278404</ref>
-
Authors: van der Beek, S.L., Le Breton, Y., Ferenbach, A.T., van Aalten, D.M.F., Navratilova, I., McIver, K., van Sorge, N.M., Dorfmueller, H.C.
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
Description:
+
== References ==
-
[[Category: Unreleased Structures]]
+
<references/>
-
[[Category: Ferenbach, A.T]]
+
__TOC__
-
[[Category: Mciver, K]]
+
</StructureSection>
-
[[Category: Van Der Beek, S.L]]
+
[[Category: DTDP-4-dehydrorhamnose reductase]]
-
[[Category: Van Aalten, D.M.F]]
+
[[Category: Aalten, D M.F van]]
-
[[Category: Van Sorge, N.M]]
+
[[Category: Beek, S L.van der]]
-
[[Category: Le Breton, Y]]
+
[[Category: Breton, Y Le]]
 +
[[Category: Dorfmueller, H C]]
 +
[[Category: Ferenbach, A T]]
 +
[[Category: McIver, K]]
[[Category: Navratilova, I]]
[[Category: Navratilova, I]]
-
[[Category: Dorfmueller, H.C]]
+
[[Category: Sorge, N M.van]]
 +
[[Category: Dtdp-4-dehydrorhamnose reductase]]
 +
[[Category: Oxidoreductase]]
 +
[[Category: Rmld]]

Revision as of 11:08, 9 September 2015

Group A Streptococcus GacA is an essential dTDP-4-dehydrorhamnose reductase (RmlD)

4wpg, resolution 1.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools