This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yb7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 2: Line 2:
<StructureSection load='1yb7' size='340' side='right' caption='[[1yb7]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
<StructureSection load='1yb7' size='340' side='right' caption='[[1yb7]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1yb7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Hevea_brasiliensis Hevea brasiliensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YB7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1yb7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Hevbr Hevbr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YB7 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ICN:(S)-2-HYDROXY-2,3-DIMETHYLBUTANENITRILE'>ICN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ICN:(S)-2-HYDROXY-2,3-DIMETHYLBUTANENITRILE'>ICN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qj4|1qj4]], [[1yas|1yas]], [[2yas|2yas]], [[3yas|3yas]], [[4yas|4yas]], [[5yas|5yas]], [[6yas|6yas]], [[7yas|7yas]], [[1sc9|1sc9]], [[1sci|1sci]], [[1sck|1sck]], [[1scq|1scq]], [[1yb6|1yb6]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qj4|1qj4]], [[1yas|1yas]], [[2yas|2yas]], [[3yas|3yas]], [[4yas|4yas]], [[5yas|5yas]], [[6yas|6yas]], [[7yas|7yas]], [[1sc9|1sc9]], [[1sci|1sci]], [[1sck|1sck]], [[1scq|1scq]], [[1yb6|1yb6]]</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HNL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3981 Hevea brasiliensis])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HNL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3981 HEVBR])</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxynitrilase Hydroxynitrilase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.37 4.1.2.37] </span></td></tr>
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lyase Lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.46 and 4.1.2.47 4.1.2.46 and 4.1.2.47] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yb7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yb7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yb7 RCSB], [http://www.ebi.ac.uk/pdbsum/1yb7 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yb7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yb7 OCA], [http://pdbe.org/1yb7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yb7 RCSB], [http://www.ebi.ac.uk/pdbsum/1yb7 PDBsum]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 29: Line 29:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 1yb7" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Hevea brasiliensis]]
+
[[Category: Hevbr]]
-
[[Category: Hydroxynitrilase]]
+
[[Category: Lyase]]
[[Category: Gartler, G]]
[[Category: Gartler, G]]
[[Category: Gruber, K]]
[[Category: Gruber, K]]
Line 40: Line 41:
[[Category: Alpha-beta hydrolase fold]]
[[Category: Alpha-beta hydrolase fold]]
[[Category: Catalytic triad]]
[[Category: Catalytic triad]]
-
[[Category: Lyase]]
 
[[Category: Substrate complex]]
[[Category: Substrate complex]]

Revision as of 14:54, 10 September 2015

Hydroxynitrile lyase from hevea brasiliensis in complex with 2,3-dimethyl-2-hydroxy-butyronitrile

1yb7, resolution 1.76Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1yb7"
Personal tools