Timothy Locksmith sandbox Heat Sock Factor

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== Introduction ==
== Introduction ==
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Heat Shock Factor (HSF) is primarily used for the transcription of Heat shock proteins, which are used primarily for the survival of a cell under high temperature stress situations.1 Its structure is highly conserved through species from flies to humans, and even all the way to yeast, which suggests that its existence is very important for the survival of organisms. Studies delving into the uses of HSF have proven promising in Cancer research fields. In some instances when cancer cells had their HSF inhibited underwent cell death instead of proliferation, thus ceasing the spread of the cancer and reducing its size. It is hypothesized that HSF is an integral part of cancer cell survival.
== Regulation ==
== Regulation ==
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HSF is inhibited by heat shock proteins under normal conditions (regarding temperature). The main regulator of HSF is the temperature of the surrounding environment. When the temperature is high, Hsp’s then associate elsewhere the in the cell with damages structures, and are therefore less likely to bind to HSF. This allows HSP to translocate to inside of the nucleus, and interact with it to produce more Hsp’s. Once enough Hsp’s are created, the damage has been taken care of and the temperature has returned to normal, they can once again bind to HSF, and inhibit it from interacting with the DNA
== Sturcture/DNA Interaction ==
== Sturcture/DNA Interaction ==
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HSF remains as a monomer when bound with Hsp under non-stressed conditions. Under stressed conditions (increased temperature) three individual monomers of HSF move into the cell’s nucleus, trimerize, and then bind to the large Groove of the DNA to Heat shock elements throughout the genome. Specifically an Arginine, and Methionine from each of the monomer bind to three oppositely oriented "AGAAN" sections of the genome.2 These residues interact with the nucleotide bases, while nearby residues inerac6t with the back bone to stabilize the transcription factor in place <scene name='71/714949/Arg_met_interact/1'>TextToBeDisplayed</scene>.
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HSF remains as a monomer when bound with Hsp under non-stressed conditions. Under stressed conditions (increased temperature) three individual monomers of HSF move into the cell’s nucleus, trimerize, and then bind to the large Groove of the DNA to Heat shock elements throughout the genome. Specifically an Arginine, and Methionine from each of the monomer bind to three oppositely oriented "AGAAN" sections of the genome.2 These residues interact with the nucleotide bases, while nearby residues inerac6t with the back bone to stabilize the transcription factor in place <scene name='71/714949/Arg_met_interact/1'>(Arg/Met location)</scene>.
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.

Revision as of 13:10, 6 October 2015

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References

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Littlefield O, Nelson HC. A new use for the 'wing' of the 'winged' helix-turn-helix motif in the HSF-DNA cocrystal. Nat Struct Biol. 1999 May;6(5):464-70. PMID:10331875 doi:10.1038/8269

Proteopedia Page Contributors and Editors (what is this?)

Timothy Locksmith, Ann Taylor

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