Ethan Farmer AP-1 Binding Site Sandbox

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The leucine zipper contains basic amino acids that help stabilize the dimer and the DNA. These basic amino acids allow for a bipartite DNA binding domain with each Fos and Jun. This dimer binds to Activator Protein-1 (AP-1) and the cAMP responsive element on a DNA strand. This, in turn, regulates the targeted gene expression. The binding of the Fos/Jun dimer is inhibited by inhibitory protein-1 (IP-1). Also, the binding of Fos/Jun is regulated by the phosphorylation of either end of the protein. The phosphorylation of the Ser63 and Ser73 amino acids near the N-terminal increases DNA binding, but phosphorylation at the C-terminal inhibits binding. The Fos/Jun dimer is naturally expressed in low basal levels inside the cell, but can be induced rapidly by extracellular stimuli.
The leucine zipper contains basic amino acids that help stabilize the dimer and the DNA. These basic amino acids allow for a bipartite DNA binding domain with each Fos and Jun. This dimer binds to Activator Protein-1 (AP-1) and the cAMP responsive element on a DNA strand. This, in turn, regulates the targeted gene expression. The binding of the Fos/Jun dimer is inhibited by inhibitory protein-1 (IP-1). Also, the binding of Fos/Jun is regulated by the phosphorylation of either end of the protein. The phosphorylation of the Ser63 and Ser73 amino acids near the N-terminal increases DNA binding, but phosphorylation at the C-terminal inhibits binding. The Fos/Jun dimer is naturally expressed in low basal levels inside the cell, but can be induced rapidly by extracellular stimuli.
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[[Image:DNA Binding.jpeg]]
== AP-1 Function ==
== AP-1 Function ==

Revision as of 02:12, 13 October 2015

Activating Protein - 1 (AP-1) Binding Site

Caption for this structure

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References

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Glover JN, Harrison SC. Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA. Nature. 1995 Jan 19;373(6511):257-61. PMID:7816143 doi:http://dx.doi.org/10.1038/373257a0

Proteopedia Page Contributors and Editors (what is this?)

Ethan P. Farmer, Christian Vukas, Michal Harel, Ann Taylor

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