Timothy Locksmith sandbox Heat Sock Factor
From Proteopedia
(Difference between revisions)
												
			
			| Line 10: | Line 10: | ||
| == Sturcture/DNA Interaction == | == Sturcture/DNA Interaction == | ||
| - | HSF remains as a monomer when bound with Hsp under non-stressed conditions. Under stressed conditions (increased temperature) three individual monomers of HSF move into the cell’s nucleus,  | + | HSF remains as a monomer when bound with Hsp under non-stressed conditions. Under stressed conditions (increased temperature) three individual monomers of HSF move into the cell’s nucleus,  (<scene name='71/714949/Dimer_hsf_with_dna_interaction/3'>trimerizes</scene>) (could only isloate a dimer structure), and then bind to the large Groove of the DNA to Heat shock elements throughout the genome.<ref>DOI 10.1126/science.8421783</ref> Specifically an <scene name='71/714949/Arg_met_interact/1'>Arginine, and Methionine</scene> from each of the monomer bind to three oppositely oriented "<scene name='71/714949/Agaa_met_arg_interact/2'>AGAAN</scene>" sections of the genome.2 These residues interact with the nucleotide bases, while nearby residues interact with the back bone to stabilize the transcription factor in place . | 
Revision as of 01:55, 28 October 2015
| 
 | |||||||||||
References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Littlefield O, Nelson HC. A new use for the 'wing' of the 'winged' helix-turn-helix motif in the HSF-DNA cocrystal. Nat Struct Biol. 1999 May;6(5):464-70. PMID:10331875 doi:10.1038/8269
- ↑ PMCID: PMC4011729
- ↑ doi: https://dx.doi.org/10.1126/science.8421783

