4yzf

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'''Unreleased structure'''
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==Crystal structure of the anion exchanger domain of human erythrocyte Band 3==
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<StructureSection load='4yzf' size='340' side='right' caption='[[4yzf]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4yzf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YZF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YZF FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4KU:2,2-ETHANE-1,2-DIYLBIS{5-[(SULFANYLMETHYL)AMINO]BENZENESULFONIC+ACID}'>4KU</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yzf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yzf OCA], [http://pdbe.org/4yzf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yzf RCSB], [http://www.ebi.ac.uk/pdbsum/4yzf PDBsum]</span></td></tr>
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</table>
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== Disease ==
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[[http://www.uniprot.org/uniprot/B3AT_HUMAN B3AT_HUMAN]] Defects in SLC4A1 are the cause of elliptocytosis type 4 (EL4) [MIM:[http://omim.org/entry/109270 109270]]. EL4 is a Rhesus-unlinked form of hereditary elliptocytosis, a genetically heterogeneous, autosomal dominant hematologic disorder. It is characterized by variable hemolytic anemia and elliptical or oval red cell shape.<ref>PMID:1722314</ref> <ref>PMID:1538405</ref> Defects in SLC4A1 are the cause of spherocytosis type 4 (SPH4) [MIM:[http://omim.org/entry/612653 612653]]; also known as hereditary spherocytosis type 4 (HS4). Spherocytosis is a hematologic disorder leading to chronic hemolytic anemia and characterized by numerous abnormally shaped erythrocytes which are generally spheroidal.<ref>PMID:8547122</ref> <ref>PMID:1378323</ref> <ref>PMID:7530501</ref> <ref>PMID:8943874</ref> <ref>PMID:8640229</ref> <ref>PMID:9207478</ref> <ref>PMID:9012689</ref> <ref>PMID:9233560</ref> <ref>PMID:9973643</ref> <ref>PMID:10580570</ref> <ref>PMID:10942416</ref> <ref>PMID:10745622</ref> <ref>PMID:11380459</ref> <ref>PMID:15813913</ref> <ref>PMID:16227998</ref> Defects in SLC4A1 are the cause of renal tubular acidosis, distal, autosomal dominant (AD-dRTA) [MIM:[http://omim.org/entry/179800 179800]]. A disease characterized by reduced ability to acidify urine, variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. Defects in SLC4A1 are the cause of renal tubular acidosis, distal, with hemolytic anemia (dRTA-HA) [MIM:[http://omim.org/entry/611590 611590]]. A disease characterized by the association of hemolytic anemia with distal renal tubular acidosis, the reduced ability to acidify urine resulting in variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. Defects in SLC4A1 are the cause of renal tubular acidosis, distal, with normal red cell morphology (dRTA-NRC) [MIM:[http://omim.org/entry/611590 611590]]. A disease characterized by reduced ability to acidify urine, variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis.
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== Function ==
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[[http://www.uniprot.org/uniprot/B3AT_HUMAN B3AT_HUMAN]] Band 3 is the major integral glycoprotein of the erythrocyte membrane. Band 3 has two functional domains. Its integral domain mediates a 1:1 exchange of inorganic anions across the membrane, whereas its cytoplasmic domain provides binding sites for cytoskeletal proteins, glycolytic enzymes, and hemoglobin.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Anion exchanger 1 (AE1), also known as band 3 or SLC4A1, plays a key role in the removal of carbon dioxide from tissues by facilitating the exchange of chloride and bicarbonate across the plasma membrane of erythrocytes. An isoform of AE1 is also present in the kidney. Specific mutations in human AE1 cause several types of hereditary hemolytic anemias and/or distal renal tubular acidosis. Here we report the crystal structure of the band 3 anion exchanger domain (AE1(CTD)) at 3.5 angstroms. The structure is locked in an outward-facing open conformation by an inhibitor. Comparing this structure with a substrate-bound structure of the uracil transporter UraA in an inward-facing conformation allowed us to identify the anion-binding position in the AE1(CTD), and to propose a possible transport mechanism that could explain why selected mutations lead to disease.
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The entry 4yzf is ON HOLD
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Crystal structure of the anion exchanger domain of human erythrocyte band 3.,Arakawa T, Kobayashi-Yurugi T, Alguel Y, Iwanari H, Hatae H, Iwata M, Abe Y, Hino T, Ikeda-Suno C, Kuma H, Kang D, Murata T, Hamakubo T, Cameron AD, Kobayashi T, Hamasaki N, Iwata S Science. 2015 Nov 6;350(6261):680-4. doi: 10.1126/science.aaa4335. PMID:26542571<ref>PMID:26542571</ref>
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Authors: Alguel, Y., Arakawa, T., Yugiri, T.K., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Suno, C.I., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A.D., Kobayashi, T., Hamasaki, N., Iwata, S.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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Description: Crystal structure of the anion exchanger domain of human erythrocyte Band 3
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<div class="pdbe-citations 4yzf" style="background-color:#fffaf0;"></div>
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[[Category: Unreleased Structures]]
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== References ==
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[[Category: Hino, T]]
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<references/>
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[[Category: Yugiri, T.K]]
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__TOC__
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[[Category: Murata, T]]
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Mus musculus]]
[[Category: Abe, Y]]
[[Category: Abe, Y]]
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[[Category: Alguel, Y]]
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[[Category: Arakawa, T]]
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[[Category: Cameron, A D]]
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[[Category: Hamakubo, T]]
[[Category: Hamasaki, N]]
[[Category: Hamasaki, N]]
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[[Category: Hamakubo, T]]
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[[Category: Hatae, H]]
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[[Category: Alguel, Y]]
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[[Category: Hino, T]]
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[[Category: Iwanari, H]]
[[Category: Iwata, M]]
[[Category: Iwata, M]]
[[Category: Iwata, S]]
[[Category: Iwata, S]]
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[[Category: Iwanari, H]]
 
[[Category: Kang, D]]
[[Category: Kang, D]]
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[[Category: Arakawa, T]]
 
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[[Category: Cameron, A.D]]
 
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[[Category: Hatae, H]]
 
[[Category: Kobayashi, T]]
[[Category: Kobayashi, T]]
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[[Category: Suno, C.I]]
 
[[Category: Kuma, H]]
[[Category: Kuma, H]]
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[[Category: Murata, T]]
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[[Category: Suno, C I]]
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[[Category: Yugiri, T K]]
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[[Category: Anion exchanger]]
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[[Category: Erythrocyte]]
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[[Category: Human membrane protein]]
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[[Category: Immune system]]

Revision as of 19:07, 30 November 2015

Crystal structure of the anion exchanger domain of human erythrocyte Band 3

4yzf, resolution 3.50Å

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