5cj4

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'''Unreleased structure'''
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==Crystal Structure of Amino Acids 1562-1622 of MYH7==
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<StructureSection load='5cj4' size='340' side='right' caption='[[5cj4]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5cj4]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CJ4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CJ4 FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5chx|5chx]], [[5cj0|5cj0]], [[5cj1|5cj1]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cj4 OCA], [http://pdbe.org/5cj4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cj4 RCSB], [http://www.ebi.ac.uk/pdbsum/5cj4 PDBsum]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/XRCC4_HUMAN XRCC4_HUMAN]] Involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair and V(D)J recombination. Binds to DNA and to DNA ligase IV (LIG4). The LIG4-XRCC4 complex is responsible for the NHEJ ligation step, and XRCC4 enhances the joining activity of LIG4. Binding of the LIG4-XRCC4 complex to DNA ends is dependent on the assembly of the DNA-dependent protein kinase complex DNA-PK to these DNA ends.<ref>PMID:8548796</ref> <ref>PMID:10854421</ref> <ref>PMID:10757784</ref> <ref>PMID:16412978</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Sarcomeric myosins have the remarkable ability to form regular bipolar thick filaments that, together with actin thin filaments, constitute the fundamental contractile unit of skeletal and cardiac muscle. This has been established for over fifty years and yet a molecular model for the thick filament has not been attained. In part this is due to the lack of a detailed molecular model for the coiled-coil that constitutes the myosin rod. The ability to self-assemble resides in the C-terminal of the section of myosin known as light meromyosin (LMM) which exhibits strong salt dependent aggregation that has inhibited structural studies. Here we evaluate the feasibility of generating a complete model for the myosin rod by combining overlapping structures of five sections of coiled-coil covering 164 amino acid residues which constitute 20% of LMM. Each section contains approximately 7-9 heptads of myosin. The problem of aggregation was overcome by incorporating the globular folding domains, Gp7 and Xrcc4 which enhance crystallization. The effect of these domains on the stability and conformation of the myosin rod was examined through biophysical studies and overlapping structures. In addition, a computational approach was developed to combine the sections into a contiguous model. The structures were aligned, trimmed to form a contiguous model, and simulated for &gt;700 ns to remove the discontinuities and achieve an equilibrated conformation that represents the native state. This experimental and computational strategy lays the foundation for building a model for the entire myosin rod. This article is protected by copyright. All rights reserved.
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The entry 5cj4 is ON HOLD until Paper Publication
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A composite approach towards a complete model of the myosin rod.,Korkmaz EN, Taylor KC, Andreas MP, Ajay G, Heinze NT, Cui Q, Rayment I Proteins. 2015 Nov 17. doi: 10.1002/prot.24964. PMID:26573747<ref>PMID:26573747</ref>
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Authors: Korkmaz, N.E., Taylor, K.C., Andreas, M.P., Ajay, G., Heinze, N.T., Cui, Q., Rayment, I.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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Description: Crystal Structure of Amino Acids 1562-1622 of MYH7
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<div class="pdbe-citations 5cj4" style="background-color:#fffaf0;"></div>
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[[Category: Unreleased Structures]]
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== References ==
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[[Category: Andreas, M.P]]
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<references/>
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[[Category: Korkmaz, N.E]]
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__TOC__
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[[Category: Taylor, K.C]]
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</StructureSection>
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[[Category: Heinze, N.T]]
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[[Category: Ajay, G]]
[[Category: Ajay, G]]
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[[Category: Andreas, M P]]
[[Category: Cui, Q]]
[[Category: Cui, Q]]
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[[Category: Heinze, N T]]
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[[Category: Korkmaz, N E]]
[[Category: Rayment, I]]
[[Category: Rayment, I]]
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[[Category: Taylor, K C]]
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[[Category: Coiled-coil]]
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[[Category: Motor protein]]
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[[Category: Myosin]]

Revision as of 16:10, 2 December 2015

Crystal Structure of Amino Acids 1562-1622 of MYH7

5cj4, resolution 3.10Å

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