703DSS

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The <scene name='71/716487/Extracellular_region/1'>extracellular region</scene> is relatively large compared to the other two regions, and contains a short C-terminus and a larger N-terminus. The N-terminus of the extracellular region is where the ligand binding occurs, and therefore deals with the agonists and antagonists. <ref>Perumal, R., & Mahesh, R. (2006). Synthesis and biological evaluation of a novel structural type of serotonin 5-HT3 receptor antagonists. Bioorganic & Medicinal Chemistry Letters, 2769-2772.</ref>
The <scene name='71/716487/Extracellular_region/1'>extracellular region</scene> is relatively large compared to the other two regions, and contains a short C-terminus and a larger N-terminus. The N-terminus of the extracellular region is where the ligand binding occurs, and therefore deals with the agonists and antagonists. <ref>Perumal, R., & Mahesh, R. (2006). Synthesis and biological evaluation of a novel structural type of serotonin 5-HT3 receptor antagonists. Bioorganic & Medicinal Chemistry Letters, 2769-2772.</ref>
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These <scene name='71/716487/Binding_site/1'>binding sites</scene> are located between two bordering subunits, assembled from three alpha-helices of one subunit and three beta-strands from the other subunit. Such connection creates a binding pocket with a small, select number of residues from each subunit pointed into the binding pocket, as opposed to the large remainder of residues that are pointing away from the binding pocket. <ref>Hassaine, G., Deluz, C., Grasso, L., Wyss, R., Tol, M., Hovius, R., . . . Nury, H. (2014)</ref> X-ray
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These <scene name='71/716487/Binding_site/1'>binding sites</scene> are located between two bordering subunits, assembled from three alpha-helices of one subunit and three beta-strands from the other subunit. Such connection creates a binding pocket with a small, select number of residues from each subunit pointed into the binding pocket, as opposed to the large remainder of residues that are pointing away from the binding pocket. <ref>Hassaine, G., Deluz, C., Grasso, L., Wyss, R., Tol, M., Hovius, R., . . . Nury, H. (2014)</ref> This binding pocket shrinks around agonists, encapsulating them, and widens around antagonists, repulsing them.
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structure of the mouse serotonin 5-HT3 receptor. Nature, 276-281.</ref> This binding pocket shrinks around agonists, encapsulating them, and widens around antagonists, repulsing them.
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The transmembrane region is within the C-terminus region, and contains four alpha-helical domains within it (M1-M4) that stretch the length of this inner, transmembrane area. These four alpha-helical domains conduct the channel openings via ion selectivity, depending on both charge and size (Hassaine et al., 2014). M2, the porous domain, contains rings of charged amino acids at both its start and its end, accounting for M2’s main contribution to ion selectivity. The M3 and M4 alpha-helices create a large loop with one another, thus assembling the intracellular region (Barnes et al., 2009).
The transmembrane region is within the C-terminus region, and contains four alpha-helical domains within it (M1-M4) that stretch the length of this inner, transmembrane area. These four alpha-helical domains conduct the channel openings via ion selectivity, depending on both charge and size (Hassaine et al., 2014). M2, the porous domain, contains rings of charged amino acids at both its start and its end, accounting for M2’s main contribution to ion selectivity. The M3 and M4 alpha-helices create a large loop with one another, thus assembling the intracellular region (Barnes et al., 2009).

Revision as of 00:08, 7 December 2015

5-HT3a Receptor

5-HT3a receptor

Drag the structure with the mouse to rotate

References

  1. Barnes, N., Hales, T., Lummis, S., & Peters, J. (2009). The 5-HT3 receptor – the relationship between structure and function. Neuropharmacology, 273-284
  2. Perumal, R., & Mahesh, R. (2006). Synthesis and biological evaluation of a novel structural type of serotonin 5-HT3 receptor antagonists. Bioorganic & Medicinal Chemistry Letters, 2769-2772.
  3. Hassaine, G., Deluz, C., Grasso, L., Wyss, R., Tol, M., Hovius, R., . . . Nury, H. (2014)

Galligan, J. J. (2002). Ligand-gated ion channels in the enteric nervous system. Neurogastroenterology & Motility, 14(6), 611-623. doi: 10.1046/j.1365-2982.2002.00363.x

Glennon, Richard A., Malgorzata Dukat, and Richard B. Westkaemper. (2000). Serotonin receptor subtypes and ligands. American College of Neuropsychopharmacology.

Gupta, D., Thangaraj, D., & Radhakrishnan, M. (2016). A novel 5HT3 antagonist 4i (N-(3-chloro-2-methylphenyl)quinoxalin-2-carboxamide) prevents diabetes-induced depressive phenotypes in mice: Modulation of serotonergic system. Behavioural Brain Research, 297, 41-50. doi:10.1016/j.bbr.2015.10.007

Hannon, J., & Hoyer, D. (2008). Research report: molecular biology of 5-HT receptors. Behavioural Brain Research, 195(Serotonin and cognition: mechanisms and applications), 198-213. doi:10.1016/j.bbr.2008.03.020

Kurhe, Y. V., Radhakrishnan, M., Thangaraj, D., & Gupta, D. (2014). Anti-anxiety effect of a novel 5-HT3 receptor antagonistN-(benzo[d]thiazol-2-yl)-3-ethoxyquinoxalin-2- carboxamide (6k) using battery tests for anxiety in mice. Indian Journal of Pharmacology, 46(1), 100–104. doi: 10.4103/0253-7613.125186

Morrison, T. R., Ricci, L. A., & Melloni, R. H., Jr. (2015). Aggression and anxiety in adolescent AAS-treated hamsters: A role for 5HT3 receptors. Pharmacology Biochemistry and Behavior, 134, 85-91. doi:10.1016/j.pbb.2015.05.001

Serotonin - Receptors and effects. (n.d.). Retrieved November 14, 2015, from http://www.pharmacorama.com/en/Sections/Serotonin_2_2.php

Thompson, A. J., & Lummis, S. C. R. (2006). 5-HT3 receptors. Current Pharmaceutical Design, 12(28), 3615–3630.

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