1bub
From Proteopedia
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|PDB= 1bub |SIZE=350|CAPTION= <scene name='initialview01'>1bub</scene> | |PDB= 1bub |SIZE=350|CAPTION= <scene name='initialview01'>1bub</scene> | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=EU:EUROPIUM ION'>EU</scene> | + | |LIGAND= <scene name='pdbligand=DG:2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5'-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bub FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bub OCA], [http://www.ebi.ac.uk/pdbsum/1bub PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1bub RCSB]</span> | ||
}} | }} | ||
| Line 24: | Line 27: | ||
[[Category: Bolton, P H.]] | [[Category: Bolton, P H.]] | ||
[[Category: Marathias, V M.]] | [[Category: Marathias, V M.]] | ||
| - | [[Category: EU]] | ||
[[Category: duplex]] | [[Category: duplex]] | ||
[[Category: eu binding dna]] | [[Category: eu binding dna]] | ||
| Line 30: | Line 32: | ||
[[Category: telomere dna]] | [[Category: telomere dna]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:08:30 2008'' |
Revision as of 16:08, 30 March 2008
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| Ligands: | , , | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
DETERMINATION OF INTERNUCLEAR ANGLES OF DNA USING PARAMAGNETIC ASSISTED MAGNETIC ALIGNMENT
Overview
Paramagnetic ions have been used to assist the magnetic alignment of DNA. The anisotropy of the binding sites is sufficient to give rise to significant alignment of the DNA with the observed proton-carbon dipolar couplings spanning a 70-Hz range. The dipolar couplings have been used to determine the positions of the axial and rhombic alignment axes. The positions of the alignment axes relative to the positions of the binding sites of the paramagnetic europium ions have also been determined.
About this Structure
1BUB is a Protein complex structure of sequences from [1]. Full crystallographic information is available from OCA.
Reference
Determination of internuclear angles of DNA using paramagnetic-assisted magnetic alignment., Beger RD, Marathias VM, Volkman BF, Bolton PH, J Magn Reson. 1998 Nov;135(1):256-9. PMID:9799703
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