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== Structure ==
== Structure ==
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This gene is located on the chromosome 2 at the location: 2q37.3 (genomic coordinates: 2:241,849,880-241,858,907)<ref>http://www.genome.jp/dbget-bin/www_bget?hsa+5133/</ref>.
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This gene is located on the chromosome 2 at the location: 2q37.3 (genomic coordinates: 2:241,849,880-241,858,907)<ref>http://www.genome.jp/dbget-bin/www_bget?hsa+5133</ref>.
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It measured 2106 bp and possessed 5 exons<ref>http://www.ncbi.nlm.nih.gov/mapview/map_search.cgi?taxid=9606&build=current&advsrch=off&query=PDCD1/</ref>.[http://www.ensembl.org/Homo_sapiens/Location/View?db=core;g=ENSG00000276977;r=CHR_HSCHR2_3_CTG15:241849881-241858908;t=ENST00000618185]
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It measured 2106 bp and possessed 5 exons<ref>http://www.ncbi.nlm.nih.gov/mapview/map_search.cgi?taxid=9606&build=current&advsrch=off&query=PDCD1</ref>.[http://www.ensembl.org/Homo_sapiens/Location/View?db=core;g=ENSG00000276977;r=CHR_HSCHR2_3_CTG15:241849881-241858908;t=ENST00000618185]
<br/>The PD-1 predicted protein possessed 288 amino acid.[http://www.uniprot.org/uniprot/Q15116#showFeatures]
<br/>The PD-1 predicted protein possessed 288 amino acid.[http://www.uniprot.org/uniprot/Q15116#showFeatures]
The PD-1 structure included an <scene name='71/719874/Extracellular_domain_of_pd-1/1'>extracellular IgV domain</scene>, a transmembrane region and an intracellular tail.
The PD-1 structure included an <scene name='71/719874/Extracellular_domain_of_pd-1/1'>extracellular IgV domain</scene>, a transmembrane region and an intracellular tail.
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This tail comported two phosphorylation site located in an immunoreceptor tyrosine based inhibitory motif and an immunoreceptor tyrosine-based switch motif<ref>http://www.uniprot.org/uniprot/Q15116/</ref>.
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This tail comported two phosphorylation site located in an immunoreceptor tyrosine based inhibitory motif and an immunoreceptor tyrosine-based switch motif<ref>http://www.uniprot.org/uniprot/Q15116</ref>.
That suggests that PD-1 negatively regulates T cells receptor signals.
That suggests that PD-1 negatively regulates T cells receptor signals.
It is agreeing with binding of Tyrosine-protein phosphatase non-receptor type 6 (SHP-1) and Tyrosine-protein phosphatase non-receptor type 11 (SHP-2) to the cytoplasmic tail of PD-1 after ligand binding.
It is agreeing with binding of Tyrosine-protein phosphatase non-receptor type 6 (SHP-1) and Tyrosine-protein phosphatase non-receptor type 11 (SHP-2) to the cytoplasmic tail of PD-1 after ligand binding.
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PD-1 ligation up-regulates E3-ubiquitin ligases CBL-b and c-CBL that trigger T cell receptor down-modulation<ref>https://en.wikipedia.org/wiki/Programmed_cell_death_1 /</ref>.
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PD-1 ligation up-regulates E3-ubiquitin ligases CBL-b and c-CBL that trigger T cell receptor down-modulation<ref>https://en.wikipedia.org/wiki/Programmed_cell_death_1</ref>.
== Inhibitor ==
== Inhibitor ==
The PD-1 protein is an inhibitory of the immune response by T cells when it interacts with its ligands PD-L1 and PD-L2.
The PD-1 protein is an inhibitory of the immune response by T cells when it interacts with its ligands PD-L1 and PD-L2.
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These ligands belong to the B7 family<ref>http://jem.rupress.org/content/192/7/1027.long/</ref>.PD-L1 is up-regulated when macrophage or dendritic cells are in contact with LPS or during a Granulocyte-macrophage colony-stimulating factor (GM-CSF) treatment.
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These ligands belong to the B7 family<ref>http://jem.rupress.org/content/192/7/1027.long</ref>.PD-L1 is up-regulated when macrophage or dendritic cells are in contact with LPS or during a Granulocyte-macrophage colony-stimulating factor (GM-CSF) treatment.
PD-L1 is also up-regulated on T cells and B cells upon TCR and B cell receptor signalling.
PD-L1 is also up-regulated on T cells and B cells upon TCR and B cell receptor signalling.
When PD1 is inhibits it upregulated a lot of genes in CD8-positive T cells.
When PD1 is inhibits it upregulated a lot of genes in CD8-positive T cells.
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These gene activation provokes an upregulation of the transcription factor BATF. The high expression of BATF impairs cell proliferation and cytokine secretion whereas BATF reduces PD1 inhibition<ref>http://omim.org/entry/600244#8/</ref>.
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These gene activation provokes an upregulation of the transcription factor BATF. The high expression of BATF impairs cell proliferation and cytokine secretion whereas BATF reduces PD1 inhibition<ref>http://omim.org/entry/600244#8</ref>.
<br/>PD-L2 expression is rarest than PD-L1 expression.
<br/>PD-L2 expression is rarest than PD-L1 expression.
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This ligand is expressed by DCs and a few tumors. The binding of PDL2 provokes an inhibition of T cells proliferation and cytokine production<ref>http://jem.rupress.org/content/192/7/1027.long/</ref>.
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This ligand is expressed by DCs and a few tumors. The binding of PDL2 provokes an inhibition of T cells proliferation and cytokine production<ref>http://jem.rupress.org/content/192/7/1027.long</ref>.
== Pathologies and clinical applications ==
== Pathologies and clinical applications ==

Revision as of 17:00, 30 January 2016

PD-1 and its ligand PD-L1 (PDB entry 3bik)

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