3d0h
From Proteopedia
(Difference between revisions)
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<StructureSection load='3d0h' size='340' side='right' caption='[[3d0h]], [[Resolution|resolution]] 3.10Å' scene=''> | <StructureSection load='3d0h' size='340' side='right' caption='[[3d0h]], [[Resolution|resolution]] 3.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3d0h]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3d0h]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Cvhsa Cvhsa] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D0H FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ajf|2ajf]], [[3d0g|3d0g]], [[3d0i|3d0i]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ajf|2ajf]], [[3d0g|3d0g]], [[3d0i|3d0i]]</td></tr> | ||
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ACE2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ACE2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), S ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=227859 CVHSA])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d0h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0h OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d0h RCSB], [http://www.ebi.ac.uk/pdbsum/3d0h PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d0h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0h OCA], [http://pdbe.org/3d0h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3d0h RCSB], [http://www.ebi.ac.uk/pdbsum/3d0h PDBsum]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d0h ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 3d0h" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Cvhsa]] |
- | [[Category: | + | [[Category: Human]] |
[[Category: Li, F]] | [[Category: Li, F]] | ||
[[Category: Ace2]] | [[Category: Ace2]] | ||
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[[Category: Host adaptation]] | [[Category: Host adaptation]] | ||
[[Category: Host-virus interaction]] | [[Category: Host-virus interaction]] | ||
- | [[Category: Human]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Lipoprotein]] | [[Category: Lipoprotein]] | ||
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[[Category: Rbd]] | [[Category: Rbd]] | ||
[[Category: Receptor-binding domain]] | [[Category: Receptor-binding domain]] | ||
+ | [[Category: Sars coronavirus]] | ||
[[Category: Secreted]] | [[Category: Secreted]] | ||
[[Category: Spike protein]] | [[Category: Spike protein]] |
Revision as of 05:27, 7 February 2016
Crystal structure of spike protein receptor-binding domain from the 2002-2003 SARS coronavirus civet strain complexed with human-civet chimeric receptor ACE2
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Categories: Cvhsa | Human | Li, F | Ace2 | Angiotensin-converting enzyme 2 | Carboxypeptidase | Chloride | Cross-species infection | Envelope protein | Glycoprotein | Host adaptation | Host-virus interaction | Hydrolase | Lipoprotein | Membrane | Metal-binding | Metalloprotease | Palm civet | Palmitate | Protease | Rbd | Receptor-binding domain | Sars coronavirus | Secreted | Spike protein | Transmembrane | Virion | Virulence | Virus-host interface