1dqe

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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dqe OCA], [http://www.ebi.ac.uk/pdbsum/1dqe PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1dqe RCSB]</span>
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[[Category: Nikonova, L.]]
[[Category: Nikonova, L.]]
[[Category: Sandler, B H.]]
[[Category: Sandler, B H.]]
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[[Category: BOM]]
 
[[Category: helical bundle]]
[[Category: helical bundle]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 10:42:37 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:46:38 2008''

Revision as of 16:46, 30 March 2008


PDB ID 1dqe

Drag the structure with the mouse to rotate
, resolution 1.8Å
Ligands:
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



BOMBYX MORI PHEROMONE BINDING PROTEIN


Overview

BACKGROUND: Insects use volatile organic molecules to communicate messages with remarkable sensitivity and specificity. In one of the most studied systems, female silkworm moths (Bombyx mori) attract male mates with the pheromone bombykol, a volatile 16-carbon alcohol. In the male moth's antennae, a pheromone-binding protein conveys bombykol to a membrane-bound receptor on a nerve cell. The structure of the pheromone-binding protein, its binding and recognition of bombykol, and its full role in signal transduction are not known. RESULTS: The three-dimensional structure of the B. mori pheromone-binding protein with bound bombykol has been determined by X-ray diffraction at 1.8 A resolution. CONCLUSIONS: The pheromone binding protein of B. mori has six helices, and bombykol binds in a completely enclosed hydrophobic cavity formed by four antiparallel helices. Bombykol is bound in this cavity through numerous hydrophobic interactions, and sequence alignments suggest critical residues for specific pheromone binding.

About this Structure

1DQE is a Single protein structure of sequence from Bombyx mori. Full crystallographic information is available from OCA.

Reference

Sexual attraction in the silkworm moth: structure of the pheromone-binding-protein-bombykol complex., Sandler BH, Nikonova L, Leal WS, Clardy J, Chem Biol. 2000 Feb;7(2):143-51. PMID:10662696

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