1dze
From Proteopedia
(Difference between revisions)
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|PDB= 1dze |SIZE=350|CAPTION= <scene name='initialview01'>1dze</scene>, resolution 2.5Å | |PDB= 1dze |SIZE=350|CAPTION= <scene name='initialview01'>1dze</scene>, resolution 2.5Å | ||
|SITE= <scene name='pdbsite=AC1:Ret+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:L1p+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC3</scene>, <scene name='pdbsite=AC4:L3p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC4</scene>, <scene name='pdbsite=AC5:L4p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC5</scene> and <scene name='pdbsite=AC6:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC6</scene> | |SITE= <scene name='pdbsite=AC1:Ret+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:L1p+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC3</scene>, <scene name='pdbsite=AC4:L3p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC4</scene>, <scene name='pdbsite=AC5:L4p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC5</scene> and <scene name='pdbsite=AC6:L2p+Binding+Site+For+Chain+A+Symmetry+Related+Subunits+C+...'>AC6</scene> | ||
| - | |LIGAND= <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:GLUCOSE'>GLC</scene>, <scene name='pdbligand=L1P:3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL'>L1P</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=L3P:2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE'>L3P</scene>, <scene name='pdbligand=L4P:3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROL'>L4P</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dze FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dze OCA], [http://www.ebi.ac.uk/pdbsum/1dze PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1dze RCSB]</span> | ||
}} | }} | ||
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[[Category: Takeda, K.]] | [[Category: Takeda, K.]] | ||
[[Category: Yamane, T.]] | [[Category: Yamane, T.]] | ||
| - | [[Category: L1P]] | ||
| - | [[Category: L2P]] | ||
| - | [[Category: L3P]] | ||
| - | [[Category: L4P]] | ||
| - | [[Category: RET]] | ||
[[Category: bacteriorhodopsin]] | [[Category: bacteriorhodopsin]] | ||
[[Category: halobacteria]] | [[Category: halobacteria]] | ||
| Line 44: | Line 42: | ||
[[Category: sliding]] | [[Category: sliding]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:51:53 2008'' |
Revision as of 16:51, 30 March 2008
| |||||||
| , resolution 2.5Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , , , and | ||||||
| Ligands: | , , , , , , , | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
STRUCTURE OF THE M INTERMEDIATE OF BACTERIORHODOPSIN TRAPPED AT 100K
About this Structure
1DZE is a Single protein structure of sequence from Halobacterium salinarum. The following page contains interesting information on the relation of 1DZE with [Bacteriorhodopsin]. Full crystallographic information is available from OCA.
Page seeded by OCA on Sun Mar 30 19:51:53 2008
Categories: Bacteriorhodopsin | Halobacterium salinarum | Single protein | Adachi, S. | Hino, T. | Iizuka, T. | Kamiya, N. | Kanamori, E. | Kouyama, T. | Matsui, Y. | Okumura, H. | Sato, H. | Takeda, K. | Yamane, T. | Halobacteria | Helix | Ion pump | Membrane protein | Photoreceptor | Proton pump | Reaction intermediate | Retinal protein | Sliding
