1ea7
From Proteopedia
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|PDB= 1ea7 |SIZE=350|CAPTION= <scene name='initialview01'>1ea7</scene>, resolution 0.93Å | |PDB= 1ea7 |SIZE=350|CAPTION= <scene name='initialview01'>1ea7</scene>, resolution 0.93Å | ||
|SITE= <scene name='pdbsite=1:S+Binding+Site+For+Chain+A'>1</scene> | |SITE= <scene name='pdbsite=1:S+Binding+Site+For+Chain+A'>1</scene> | ||
| - | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene> | + | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=S:SULFUR+ATOM'>S</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ea7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ea7 OCA], [http://www.ebi.ac.uk/pdbsum/1ea7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ea7 RCSB]</span> | ||
}} | }} | ||
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[[Category: Klein, D.]] | [[Category: Klein, D.]] | ||
[[Category: Shoham, G.]] | [[Category: Shoham, G.]] | ||
| - | [[Category: CA]] | ||
| - | [[Category: S]] | ||
[[Category: serine protease]] | [[Category: serine protease]] | ||
[[Category: sphericase]] | [[Category: sphericase]] | ||
[[Category: subtilisin like protease]] | [[Category: subtilisin like protease]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:58:28 2008'' |
Revision as of 16:58, 30 March 2008
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| , resolution 0.93Å | |||||||
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| Sites: | |||||||
| Ligands: | , | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
SPHERICASE
Overview
We have previously isolated sphericase (Sph), an extracellular mesophilic serine protease produced by Bacillus sphaericus. The Sph amino acid sequence is highly homologous to two cold-adapted subtilisins from Antarctic bacilli S39 and S41 (76% and 74% identity, respectively). Sph is calcium-dependent, 310 amino acid residues long and has optimal activity at pH 10.0. S41 and S39 have not as yet been structurally analysed.In the present work, we determined the crystal structure of Sph by the Eu/multiwavelength anomalous diffraction method. The structure was extended to 0.93A resolution and refined to a crystallographic R-factor of 9.7%. The final model included all 310 amino acid residues, one disulfide bond, 679 water molecules and five calcium ions. Although Sph is a mesophilic subtilisin, its amino acid sequence is similar to that of the psychrophilic subtilisins, which suggests that the crystal structure of these subtilisins is very similar.The presence of five calcium ions bound to a subtilisin molecule, as found here for Sph, has not been reported for the subtilisin superfamily. None of these calcium-binding sites correlates with the well-known high-affinity calcium-binding site (site I or site A), and only one site has been described previously. This calcium-binding pattern suggests that a reduction in the flexibility of the surface loops of Sph by calcium binding may be responsible for its adaptation to mesophilic organisms.
About this Structure
1EA7 is a Single protein structure of sequence from Lysinibacillus sphaericus. Full crystallographic information is available from OCA.
Reference
The 0.93A crystal structure of sphericase: a calcium-loaded serine protease from Bacillus sphaericus., Almog O, Gonzalez A, Klein D, Greenblatt HM, Braun S, Shoham G, J Mol Biol. 2003 Oct 3;332(5):1071-82. PMID:14499610
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