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2w6y
From Proteopedia
(Difference between revisions)
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<StructureSection load='2w6y' size='340' side='right' caption='[[2w6y]], [[Resolution|resolution]] 1.60Å' scene=''> | <StructureSection load='2w6y' size='340' side='right' caption='[[2w6y]], [[Resolution|resolution]] 1.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2w6y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2w6y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Phycd Phycd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W6Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W6Y FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1cik|1cik]], [[103m|103m]], [[1bvc|1bvc]], [[4mbn|4mbn]], [[1vxb|1vxb]], [[112m|112m]], [[2evp|2evp]], [[1mtk|1mtk]], [[2mge|2mge]], [[1yoh|1yoh]], [[2mgc|2mgc]], [[1f65|1f65]], [[1jdo|1jdo]], [[1lue|1lue]], [[2g0v|2g0v]], [[2blj|2blj]], [[1tes|1tes]], [[1dxc|1dxc]], [[2spl|2spl]], [[2d6c|2d6c]], [[1mlh|1mlh]], [[2w6w|2w6w]], [[1mlm|1mlm]], [[1mbn|1mbn]], [[1mlj|1mlj]], [[2mgi|2mgi]], [[2bwh|2bwh]], [[1myz|1myz]], [[1n9f|1n9f]], [[1jpb|1jpb]], [[2g0s|2g0s]], [[1mls|1mls]], [[1mbd|1mbd]], [[1mti|1mti]], [[106m|106m]], [[1mlo|1mlo]], [[1do3|1do3]], [[1cpw|1cpw]], [[101m|101m]], [[2g0x|2g0x]], [[1vxd|1vxd]], [[1l2k|1l2k]], [[2bli|2bli]], [[1jp9|1jp9]], [[1mlg|1mlg]], [[2mgg|2mgg]], [[1ch9|1ch9]], [[2mbw|2mbw]], [[1vxf|1vxf]], [[1u7s|1u7s]], [[2mgj|2mgj]], [[111m|111m]], [[2blh|2blh]], [[1mbi|1mbi]], [[105m|105m]], [[1vxh|1vxh]], [[1mln|1mln]], [[1h1x|1h1x]], [[1cp5|1cp5]], [[1f6h|1f6h]], [[1do1|1do1]], [[1n9h|1n9h]], [[1spe|1spe]], [[1myf|1myf]], [[1mll|1mll]], [[1a6g|1a6g]], [[1mbo|1mbo]], [[1ch5|1ch5]], [[102m|102m]], [[1yoi|1yoi]], [[1ltw|1ltw]], [[2w6x|2w6x]], [[2spm|2spm]], [[2g0z|2g0z]], [[1bvd|1bvd]], [[1hjt|1hjt]], [[1wvp|1wvp]], [[2myb|2myb]], [[1do4|1do4]], [[1moa|1moa]], [[1ebc|1ebc]], [[1ch1|1ch1]], [[1mym|1mym]], [[1mlk|1mlk]], [[1mlq|1mlq]], [[1mgn|1mgn]], [[1mlf|1mlf]], [[2spn|2spn]], [[1ch3|1ch3]], [[1ch7|1ch7]], [[5mbn|5mbn]], [[1cq2|1cq2]], [[1fcs|1fcs]], [[1moc|1moc]], [[1do7|1do7]], [[2mgh|2mgh]], [[2mb5|2mb5]], [[1cio|1cio]], [[1mbc|1mbc]], [[2g0r|2g0r]], [[1yog|1yog]], [[1jp6|1jp6]], [[1u7r|1u7r]], [[1ofj|1ofj]], [[2g10|2g10]], [[1cp0|1cp0]], [[1ajh|1ajh]], [[109m|109m]], [[2g14|2g14]], [[2bw9|2bw9]], [[1duk|1duk]], [[1vxa|1vxa]], [[2mye|2mye]], [[1n9i|1n9i]], [[1mz0|1mz0]], [[1dxd|1dxd]], [[1bzr|1bzr]], [[1dti|1dti]], [[1mcy|1mcy]], [[1f63|1f63]], [[1abs|1abs]], [[2mgf|2mgf]], [[1vxg|1vxg]], [[1swm|1swm]], [[110m|110m]], [[2g12|2g12]], [[1a6n|1a6n]], [[1n9x|1n9x]], [[1ofk|1ofk]], [[2myc|2myc]], [[1dtm|1dtm]], [[1ufp|1ufp]], [[2spo|2spo]], [[2mgb|2mgb]], [[2mgm|2mgm]], [[1jw8|1jw8]], [[1o16|1o16]], [[1vxc|1vxc]], [[1a6k|1a6k]], [[2mga|2mga]], [[1mlr|1mlr]], [[1irc|1irc]], [[1vxe|1vxe]], [[1ajg|1ajg]], [[2mgl|2mgl]], [[1mtj|1mtj]], [[1mlu|1mlu]], [[2mya|2mya]], [[1obm|1obm]], [[1co9|1co9]], [[1a6m|1a6m]], [[1co8|1co8]], [[2cmm|2cmm]], [[107m|107m]], [[108m|108m]], [[1naz|1naz]], [[2myd|2myd]], [[2jho|2jho]], [[1ch2|1ch2]], [[2g11|2g11]], [[104m|104m]], [[1duo|1duo]], [[1jp8|1jp8]], [[2mgd|2mgd]], [[1mod|1mod]], [[1j3f|1j3f]], [[1j52|1j52]], [[1iop|1iop]], [[1bz6|1bz6]], [[1mob|1mob]], [[1bzp|1bzp]], [[2mgk|2mgk]], [[1ufj|1ufj]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1cik|1cik]], [[103m|103m]], [[1bvc|1bvc]], [[4mbn|4mbn]], [[1vxb|1vxb]], [[112m|112m]], [[2evp|2evp]], [[1mtk|1mtk]], [[2mge|2mge]], [[1yoh|1yoh]], [[2mgc|2mgc]], [[1f65|1f65]], [[1jdo|1jdo]], [[1lue|1lue]], [[2g0v|2g0v]], [[2blj|2blj]], [[1tes|1tes]], [[1dxc|1dxc]], [[2spl|2spl]], [[2d6c|2d6c]], [[1mlh|1mlh]], [[2w6w|2w6w]], [[1mlm|1mlm]], [[1mbn|1mbn]], [[1mlj|1mlj]], [[2mgi|2mgi]], [[2bwh|2bwh]], [[1myz|1myz]], [[1n9f|1n9f]], [[1jpb|1jpb]], [[2g0s|2g0s]], [[1mls|1mls]], [[1mbd|1mbd]], [[1mti|1mti]], [[106m|106m]], [[1mlo|1mlo]], [[1do3|1do3]], [[1cpw|1cpw]], [[101m|101m]], [[2g0x|2g0x]], [[1vxd|1vxd]], [[1l2k|1l2k]], [[2bli|2bli]], [[1jp9|1jp9]], [[1mlg|1mlg]], [[2mgg|2mgg]], [[1ch9|1ch9]], [[2mbw|2mbw]], [[1vxf|1vxf]], [[1u7s|1u7s]], [[2mgj|2mgj]], [[111m|111m]], [[2blh|2blh]], [[1mbi|1mbi]], [[105m|105m]], [[1vxh|1vxh]], [[1mln|1mln]], [[1h1x|1h1x]], [[1cp5|1cp5]], [[1f6h|1f6h]], [[1do1|1do1]], [[1n9h|1n9h]], [[1spe|1spe]], [[1myf|1myf]], [[1mll|1mll]], [[1a6g|1a6g]], [[1mbo|1mbo]], [[1ch5|1ch5]], [[102m|102m]], [[1yoi|1yoi]], [[1ltw|1ltw]], [[2w6x|2w6x]], [[2spm|2spm]], [[2g0z|2g0z]], [[1bvd|1bvd]], [[1hjt|1hjt]], [[1wvp|1wvp]], [[2myb|2myb]], [[1do4|1do4]], [[1moa|1moa]], [[1ebc|1ebc]], [[1ch1|1ch1]], [[1mym|1mym]], [[1mlk|1mlk]], [[1mlq|1mlq]], [[1mgn|1mgn]], [[1mlf|1mlf]], [[2spn|2spn]], [[1ch3|1ch3]], [[1ch7|1ch7]], [[5mbn|5mbn]], [[1cq2|1cq2]], [[1fcs|1fcs]], [[1moc|1moc]], [[1do7|1do7]], [[2mgh|2mgh]], [[2mb5|2mb5]], [[1cio|1cio]], [[1mbc|1mbc]], [[2g0r|2g0r]], [[1yog|1yog]], [[1jp6|1jp6]], [[1u7r|1u7r]], [[1ofj|1ofj]], [[2g10|2g10]], [[1cp0|1cp0]], [[1ajh|1ajh]], [[109m|109m]], [[2g14|2g14]], [[2bw9|2bw9]], [[1duk|1duk]], [[1vxa|1vxa]], [[2mye|2mye]], [[1n9i|1n9i]], [[1mz0|1mz0]], [[1dxd|1dxd]], [[1bzr|1bzr]], [[1dti|1dti]], [[1mcy|1mcy]], [[1f63|1f63]], [[1abs|1abs]], [[2mgf|2mgf]], [[1vxg|1vxg]], [[1swm|1swm]], [[110m|110m]], [[2g12|2g12]], [[1a6n|1a6n]], [[1n9x|1n9x]], [[1ofk|1ofk]], [[2myc|2myc]], [[1dtm|1dtm]], [[1ufp|1ufp]], [[2spo|2spo]], [[2mgb|2mgb]], [[2mgm|2mgm]], [[1jw8|1jw8]], [[1o16|1o16]], [[1vxc|1vxc]], [[1a6k|1a6k]], [[2mga|2mga]], [[1mlr|1mlr]], [[1irc|1irc]], [[1vxe|1vxe]], [[1ajg|1ajg]], [[2mgl|2mgl]], [[1mtj|1mtj]], [[1mlu|1mlu]], [[2mya|2mya]], [[1obm|1obm]], [[1co9|1co9]], [[1a6m|1a6m]], [[1co8|1co8]], [[2cmm|2cmm]], [[107m|107m]], [[108m|108m]], [[1naz|1naz]], [[2myd|2myd]], [[2jho|2jho]], [[1ch2|1ch2]], [[2g11|2g11]], [[104m|104m]], [[1duo|1duo]], [[1jp8|1jp8]], [[2mgd|2mgd]], [[1mod|1mod]], [[1j3f|1j3f]], [[1j52|1j52]], [[1iop|1iop]], [[1bz6|1bz6]], [[1mob|1mob]], [[1bzp|1bzp]], [[2mgk|2mgk]], [[1ufj|1ufj]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w6y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2w6y RCSB], [http://www.ebi.ac.uk/pdbsum/2w6y PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w6y OCA], [http://pdbe.org/2w6y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w6y RCSB], [http://www.ebi.ac.uk/pdbsum/2w6y PDBsum]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[http://www.uniprot.org/uniprot/ | + | [[http://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC]] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 17: | Line 17: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w6y ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 25: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Phycd]] |
[[Category: Brunori, M]] | [[Category: Brunori, M]] | ||
[[Category: Draghi, F]] | [[Category: Draghi, F]] | ||
Revision as of 04:15, 9 February 2016
CRYSTAL STRUCTURE OF SPERM WHALE MYOGLOBIN MUTANT YQR IN COMPLEX WITH XENON
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Categories: Phycd | Brunori, M | Draghi, F | Johnson, K A | Miele, A E | Renzi, F | Savino, C | Sciara, G | Vallone, B | Heme | Hydrophobic cavity | Iron | Metal-binding | Muscle protein | Oxygen storage | Oxygen transport | Transport | Xenon docking site
