This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3d7l
From Proteopedia
(Difference between revisions)
| Line 2: | Line 2: | ||
<StructureSection load='3d7l' size='340' side='right' caption='[[3d7l]], [[Resolution|resolution]] 2.06Å' scene=''> | <StructureSection load='3d7l' size='340' side='right' caption='[[3d7l]], [[Resolution|resolution]] 2.06Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3d7l]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3d7l]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"listeria_innocua"_seeliger_and_schoofs_1979 "listeria innocua" seeliger and schoofs 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D7L FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lin1944 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1642 Listeria innocua])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lin1944 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1642 "Listeria innocua" Seeliger and Schoofs 1979])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d7l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d7l RCSB], [http://www.ebi.ac.uk/pdbsum/3d7l PDBsum], [http://www.topsan.org/Proteins/MCSG/3d7l TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d7l OCA], [http://pdbe.org/3d7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3d7l RCSB], [http://www.ebi.ac.uk/pdbsum/3d7l PDBsum], [http://www.topsan.org/Proteins/MCSG/3d7l TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 15: | Line 15: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d7l ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Listeria innocua]] | + | [[Category: Listeria innocua seeliger and schoofs 1979]] |
[[Category: Bigelow, L]] | [[Category: Bigelow, L]] | ||
[[Category: Gu, M]] | [[Category: Gu, M]] | ||
| Line 27: | Line 27: | ||
[[Category: Apc89317]] | [[Category: Apc89317]] | ||
[[Category: Lin1944]] | [[Category: Lin1944]] | ||
| + | [[Category: Listeria innocua]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: PSI, Protein structure initiative]] | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 15:40, 9 February 2016
The crystal structure of the protein lin1944 from Listeria innocua .
| |||||||||||

