3dip
From Proteopedia
(Difference between revisions)
| Line 2: | Line 2: | ||
<StructureSection load='3dip' size='340' side='right' caption='[[3dip]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='3dip' size='340' side='right' caption='[[3dip]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dip]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3dip]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Miscellaneous_nucleic_acid Miscellaneous nucleic acid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DIP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DIP FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIC:(2R)-2-[(3S)-3-AMINO-2,5-DIOXOPYRROLIDIN-1-YL]-3-SULFANYLPROPANOIC+ACID'>SIC</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIC:(2R)-2-[(3S)-3-AMINO-2,5-DIOXOPYRROLIDIN-1-YL]-3-SULFANYLPROPANOIC+ACID'>SIC</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dip OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dip RCSB], [http://www.ebi.ac.uk/pdbsum/3dip PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dip TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dip OCA], [http://pdbe.org/3dip PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dip RCSB], [http://www.ebi.ac.uk/pdbsum/3dip PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dip TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 15: | Line 15: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dip ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 22: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Miscellaneous nucleic acid]] |
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
[[Category: Bain, K T]] | [[Category: Bain, K T]] | ||
Revision as of 21:11, 9 February 2016
Crystal structure of an enolase protein from the environmental genome shotgun sequencing of the Sargasso Sea
| |||||||||||
Categories: Miscellaneous nucleic acid | Almo, S C | Bain, K T | Bonanno, J B | Burley, S K | Freeman, J | Structural genomic | Ozyurt, S | Sauder, J M | Smith, D | Wasserman, S | Zhang, F | Isomerase | Lyase | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative
