This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Sandbox Wabash24

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
-
<scene name='72/725353/Labels_of_heme_groups/3'>Ligand Labels</scene>
 
-
Labels showing the sulfate, carbonyl, and Calcium ligands
+
Structure also includes sulfate, carbonyl, and Calcium <scene name='72/725353/Labels_of_heme_groups/3'>ligands</scene>
The role of asp 102 and his 57 during Trypsin catalysis is to effectively function as a proton shuttle.
The role of asp 102 and his 57 during Trypsin catalysis is to effectively function as a proton shuttle.
- 
-
<scene name='72/725353/His_57/2'>His 57 Location Highlighted in Green</scene>
 
-
Location of His 57 residue which shows the alpha helix regular secondary structure.
 
<scene name='72/725353/Asp_102/2'>Asp 102 Location Highlighted in Magenta</scene>
<scene name='72/725353/Asp_102/2'>Asp 102 Location Highlighted in Magenta</scene>
Location of Asp 102 residue which shows the beta sheet regular secondary structure.
Location of Asp 102 residue which shows the beta sheet regular secondary structure.
-
<scene name='72/725353/His_57/3'>TextToBeDisplayed</scene>
 
== Function ==
== Function ==
- 
-
== Disease ==
 
- 
-
== Relevance ==
 
== Structural highlights ==
== Structural highlights ==
-
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
+
Structure also includes sulfate, carbonyl, and Calcium <scene name='72/725353/Labels_of_heme_groups/3'>ligands</scene>
<scene name='72/725353/Labels_of_heme_groups/1'>Heme Groups</scene>
<scene name='72/725353/Labels_of_heme_groups/1'>Heme Groups</scene>

Revision as of 05:12, 19 February 2016

Trypsin Mechanism (By: Andrew Powell, Bilal Jawed, Mazin Hakim)

PDB ID 2agg

Drag the structure with the mouse to rotate

References

  1. ↑ Radisky ES, Lee JM, Lu CJ, Koshland DE Jr. Insights into the serine protease mechanism from atomic resolution structures of trypsin reaction intermediates. Proc Natl Acad Sci U S A. 2006 May 2;103(18):6835-40. Epub 2006 Apr 24. PMID:16636277
Retrieved from "http://52.214.119.220/wiki/index.php/Sandbox_Wabash24"
Personal tools