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From Proteopedia
(Difference between revisions)
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==Overall Structure== | ==Overall Structure== | ||
-Secondary Structure: | -Secondary Structure: | ||
| - | The <scene name='48/483887/Secondary_structure/2'>secondary structure</scene> is | + | The <scene name='48/483887/Secondary_structure/2'>secondary structure</scene> is made up of eight alpha helices. There are seven transmembrane alpha helices and a carboxy-terminal helix VII, which is parallel to the membrane bilayer. |
| + | Only one disulphide bond the amino terminus with helix VII | ||
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- Polar vs nonpolar: | - Polar vs nonpolar: | ||
| - | Polar regions are pink. Nonpolar, or | + | Polar regions are pink. Nonpolar, or hydrophobic, regions are grey. <scene name='48/483887/Polar__nonpolar/1'>Polar and nonplar</scene> |
-N to C termini: | -N to C termini: | ||
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==Binding Interactions== | ==Binding Interactions== | ||
| - | The <scene name='48/483887/Binding_site/4'>Binding Site</scene> of P2Y12 is colored in purple, which is the | + | The <scene name='48/483887/Binding_site/4'>Binding Site</scene> of P2Y12 is colored in purple, which is the buried site, along with the ligands, which is colored in yellow. |
==Additional Features== | ==Additional Features== | ||
Revision as of 15:36, 3 March 2016
| This Sandbox is Reserved from January 19, 2016, through August 31, 2016 for use for Proteopedia Team Projects by the class Chemistry 423 Biochemistry for Chemists taught by Lynmarie K Thompson at University of Massachusetts Amherst, USA. This reservation includes Sandbox Reserved 425 through Sandbox Reserved 439. |
P2Y12 Receptor in Complex with Clopidogrel (4ntj)[1]
by [Cora Ricker, Lauren Timmins, Aidan Finnerty, Adam Murphy, Duy Nguyen]
Student Projects for UMass Chemistry 423 Spring 2016
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