Sandbox Reserved 430

Introduction

OUTLINE FOR INTRODUCTION:

A)P2Y receptors are a subunit of a catergory of purinergic G-protein-coupled receptors

Cell receptors have specificity for ATP or ADP over adenosine P2Y12-->platelet activation and thrombus formation Drugs Candidates - engineered molecules (allosteric regulators) that can inhibit P2Y12 receptors through conformational change and active site inhibition. B) Plavix, Effient, and Brilinta

Effects on P2Y12

C)ADZ1283 - Binding and Pocket Chemistry D) Differences between P2Y12r with and without ADZ1283

Note: Green Scene still to come

Overall Structure

-Secondary Structure: 

The is made up of eight alpha helices. There are seven transmembrane alpha helices and a carboxy-terminal helix VII, which is parallel to the membrane bilayer. Only one disulphide bond the amino terminus with helix VII Helix V: straight conformation because there are no proline or glycine residues to destabilize its structure

- Polar vs nonpolar: Polar regions are pink. Nonpolar, or hydrophobic, regions are grey.

-N to C termini:

The protein shown in displays the the N and C termini

Binding Interactions

The of P2Y12 is colored in purple, which is the buried site, along with the ligands, which is colored in yellow.

Additional Features

Quiz Question 1

See Also

• 4ntj
• 4pxz
• 4py0
• 1vz1

Credits

Introduction - Adam Murphy

Overall Structure - Cora Ricker

Drug Binding Site - Duy Nguyen

Additional Features - Lauren Timmins

Quiz Question 1 - Aidan Finnerty

References

1. ↑ Zhang K, Zhang J, Gao ZG, Zhang D, Zhu L, Han GW, Moss SM, Paoletta S, Kiselev E, Lu W, Fenalti G, Zhang W, Muller CE, Yang H, Jiang H, Cherezov V, Katritch V, Jacobson KA, Stevens RC, Wu B, Zhao Q. Structure of the human P2Y12 receptor in complex with an antithrombotic drug. Nature. 2014 May 1;509(7498):115-8. doi: 10.1038/nature13083. Epub 2014 Mar 23. PMID:24670650 doi:http://dx.doi.org/10.1038/nature13083