1gv9
From Proteopedia
| Line 4: | Line 4: | ||
|PDB= 1gv9 |SIZE=350|CAPTION= <scene name='initialview01'>1gv9</scene>, resolution 1.46Å | |PDB= 1gv9 |SIZE=350|CAPTION= <scene name='initialview01'>1gv9</scene>, resolution 1.46Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=SO4:SULFATE ION'>SO4</scene> | + | |LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gv9 OCA], [http://www.ebi.ac.uk/pdbsum/1gv9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gv9 RCSB]</span> | ||
}} | }} | ||
| Line 27: | Line 30: | ||
[[Category: Svensson, K.]] | [[Category: Svensson, K.]] | ||
[[Category: Velloso, L M.]] | [[Category: Velloso, L M.]] | ||
| - | [[Category: SO4]] | ||
[[Category: carbohydrate binding]] | [[Category: carbohydrate binding]] | ||
[[Category: lectin]] | [[Category: lectin]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:52:00 2008'' |
Revision as of 17:52, 30 March 2008
| |||||||
| , resolution 1.46Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | |||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
P58/ERGIC-53
Overview
p58/ERGIC-53 is an animal calcium-dependent lectin that cycles between the endoplasmic reticulum (ER) and the Golgi complex and appears to act as a cargo receptor for a subset of soluble glycoproteins exported from the ER. We have determined the crystal structure of the carbohydrate recognition domain (CRD) of p58, the rat homologue of human ERGIC-53, to 1.46 A resolution. The fold and ligand binding site are most similar to those of leguminous lectins. The structure also resembles that of the CRD of the ER folding chaperone calnexin and the neurexins, a family of non-lectin proteins expressed on neurons. The CRD comprises one concave and one convex beta-sheet packed into a beta-sandwich. The ligand binding site resides in a negatively charged cleft formed by conserved residues. A large surface patch of conserved residues with a putative role in protein-protein interactions and oligomerization lies on the opposite side of the ligand binding site. Together with previous functional data, the structure defines a new and expanding class of calcium-dependent animal lectins and provides a starting point for the understanding of glycoprotein sorting between the ER and the Golgi.
About this Structure
1GV9 is a Single protein structure of sequence from Rattus norvegicus. Full crystallographic information is available from OCA.
Reference
Crystal structure of the carbohydrate recognition domain of p58/ERGIC-53, a protein involved in glycoprotein export from the endoplasmic reticulum., Velloso LM, Svensson K, Schneider G, Pettersson RF, Lindqvist Y, J Biol Chem. 2002 May 3;277(18):15979-84. Epub 2002 Feb 15. PMID:11850423
Page seeded by OCA on Sun Mar 30 20:52:00 2008
