2nab

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m (Protected "2nab" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 2nab is ON HOLD
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==Nizp1-C2HR zinc finger structure==
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<StructureSection load='2nab' size='340' side='right' caption='[[2nab]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2nab]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NAB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NAB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2naa|2naa]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nab FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nab OCA], [http://pdbe.org/2nab PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2nab RCSB], [http://www.ebi.ac.uk/pdbsum/2nab PDBsum]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/ZN496_MOUSE ZN496_MOUSE]] DNA-binding transcription factor that can both act as an activator and a repressor.<ref>PMID:15169884</ref> <ref>PMID:17521633</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Sotos syndrome is an overgrowth syndrome caused by mutations within the functional domains of NSD1 gene coding for NSD1, a multidomain protein regulating chromatin structure and gene expression. In particular, PHDVC5HCHNSD1 tandem domain, composed by a classical (PHDV) and an atypical (C5HCH) plant homeo-domain (PHD) finger, is target of several pathological missense-mutations. PHDVC5HCHNSD1 is also crucial for NSD1-dependent transcriptional regulation and interacts with the C2HR domain of transcriptional repressor Nizp1 (C2HRNizp1) in vitro. To get molecular insights into the mechanisms dictating the patho-physiological relevance of the PHD finger tandem domain, we solved its solution structure and provided a structural rationale for the effects of seven Sotos syndrome point-mutations. To investigate PHDVC5HCHNSD1 role as structural platform for multiple interactions, we characterized its binding to histone H3 peptides and to C2HRNizp1 by ITC and NMR. We observed only very weak electrostatic interactions with histone H3 N-terminal tails, conversely we proved specific binding to C2HRNizp1. We solved C2HRNizp1 solution structure and generated a 3D model of the complex, corroborated by site-directed mutagenesis. We suggest a mechanistic scenario where NSD1 interactions with cofactors such as Nizp1 are impaired by PHDVC5HCHNSD1 pathological mutations, thus impacting on the repression of growth-promoting genes, leading to overgrowth conditions.
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Authors: Berardi, A., Quilici, G., Spiliotopoulos, D., Corral-Rodriguez, M., Martin, F., Degano, M., Tonon, G., Musco, G.
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Structural basis for PHDVC5HCHNSD1-C2HRNizp1 interaction: implications for Sotos syndrome.,Berardi A, Quilici G, Spiliotopoulos D, Corral-Rodriguez MA, Martin-Garcia F, Degano M, Tonon G, Ghitti M, Musco G Nucleic Acids Res. 2016 Feb 20. pii: gkw103. PMID:26896805<ref>PMID:26896805</ref>
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Description: Nizp1-C2HR zinc finger structure
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Martin, F]]
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<div class="pdbe-citations 2nab" style="background-color:#fffaf0;"></div>
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[[Category: Tonon, G]]
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== References ==
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[[Category: Degano, M]]
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<references/>
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__TOC__
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</StructureSection>
[[Category: Berardi, A]]
[[Category: Berardi, A]]
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[[Category: Quilici, G]]
 
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[[Category: Spiliotopoulos, D]]
 
[[Category: Corral-Rodriguez, M]]
[[Category: Corral-Rodriguez, M]]
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[[Category: Degano, M]]
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[[Category: Martin, F]]
[[Category: Musco, G]]
[[Category: Musco, G]]
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[[Category: Quilici, G]]
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[[Category: Spiliotopoulos, D]]
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[[Category: Tonon, G]]
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[[Category: C2hr]]
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[[Category: Nizp1]]
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[[Category: Nsd1]]
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[[Category: Transcription]]
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[[Category: Zinc finger]]

Revision as of 03:44, 10 March 2016

Nizp1-C2HR zinc finger structure

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