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== Human metabotropic glutamate receptor 5 transmembrane domain ==
== Human metabotropic glutamate receptor 5 transmembrane domain ==
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<StructureSection load='4oo9' size='300' frame='true' side='right' caption='Human metabotropic glutamate receptor 5 transmembrane domain' scene='72/721531/Protien_clean_sce/5'>
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<StructureSection load='4oo9' size='300' frame='true' side='right' caption='Human metabotropic glutamate receptor 5 transmembrane domain bound to mavoglurant (PDB code of [http://www.rcsb.org/pdb/explore/explore.do?structureId=4oo9 4oo9]). The 7 helices comprise the bulk of the protein structure. mGlu5 receptor is an important part of the glutamate signaling pathway ' scene='72/721531/Protien_clean_sce/5'>
Receiving and responding to extracellular messages is critical to the proper function of the nervous system. Glutamate is the primary excitory neurotransmitter of the Central Nervous System (CNS), and metabotropic glutamate receptor 5 is a key member of the glutamate signaling pathway<ref name="Dore" />. Metabotropic glutamate receptor 5 is a homodimeric [[GPCR]] that resides in the cellular membrane <ref name="Dore" />. mGlu5 is a member of the Class C GPCR family and can further be categorized into the Group I subgroup<ref name="Wu" />.
Receiving and responding to extracellular messages is critical to the proper function of the nervous system. Glutamate is the primary excitory neurotransmitter of the Central Nervous System (CNS), and metabotropic glutamate receptor 5 is a key member of the glutamate signaling pathway<ref name="Dore" />. Metabotropic glutamate receptor 5 is a homodimeric [[GPCR]] that resides in the cellular membrane <ref name="Dore" />. mGlu5 is a member of the Class C GPCR family and can further be categorized into the Group I subgroup<ref name="Wu" />.
The functionality of the mGlu5 receptor is determined by conformational changes throughout multiple domains. mGlu5 will bind glutamate through its extracellular Venus flytrap domain and the signal will be transduced across the membrane to a heterotrimeric G protein, which will ultimately lead to calcium release and the activation of [[PKC]]<ref name="Wu" />. The signal is relayed through a Gq/11 pathway<ref name="Dore" />. Activated PKC will elicit a excitory post-synaptic response and modulate long term potentiation<ref name="Wu" />.
The functionality of the mGlu5 receptor is determined by conformational changes throughout multiple domains. mGlu5 will bind glutamate through its extracellular Venus flytrap domain and the signal will be transduced across the membrane to a heterotrimeric G protein, which will ultimately lead to calcium release and the activation of [[PKC]]<ref name="Wu" />. The signal is relayed through a Gq/11 pathway<ref name="Dore" />. Activated PKC will elicit a excitory post-synaptic response and modulate long term potentiation<ref name="Wu" />.
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*Bicyclic ring of mavoglurant surrounded by <scene name='72/721531/Protien_hydrophobic/1'>hydrophobic binding pocket</scene>.
*Bicyclic ring of mavoglurant surrounded by <scene name='72/721531/Protien_hydrophobic/1'>hydrophobic binding pocket</scene>.
*2 Catalytic <scene name='72/721531/Protien_bindmiddle/2'>serine</scene> residues H-bond to the hydroxyl oxygen of our ligand.
*2 Catalytic <scene name='72/721531/Protien_bindmiddle/2'>serine</scene> residues H-bond to the hydroxyl oxygen of our ligand.
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*A <scene name='72/721531/Protien_bindbottom/1'>water molecular</scene> inside of the binding pocket helps stabilize the inactive state.
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*A <scene name='72/721531/Protien_bindbottom/1'>water molecule</scene> inside of the binding pocket helps stabilize the inactive state.
Once bound to mavoglurant, transmembrane helix 7 undergoes a conformational change<ref name="Dore" />. The shifting of TM7 will lead to a more global conformational change, which inactivates the receptor<ref name="Dore" />. Variation can be seen in positioning of alpha helices across receptor class. Class C receptors have seemingly less space for mavoglurant to enter as compared to Class A and F receptors<ref name="Wu" />. The position of the ligand binding site is also varied between different classes of mGlu receptors<ref name="Dore" />.
Once bound to mavoglurant, transmembrane helix 7 undergoes a conformational change<ref name="Dore" />. The shifting of TM7 will lead to a more global conformational change, which inactivates the receptor<ref name="Dore" />. Variation can be seen in positioning of alpha helices across receptor class. Class C receptors have seemingly less space for mavoglurant to enter as compared to Class A and F receptors<ref name="Wu" />. The position of the ligand binding site is also varied between different classes of mGlu receptors<ref name="Dore" />.

Revision as of 12:58, 12 April 2016

Human metabotropic glutamate receptor 5 transmembrane domain

Human metabotropic glutamate receptor 5 transmembrane domain bound to mavoglurant (PDB code of 4oo9). The 7 helices comprise the bulk of the protein structure. mGlu5 receptor is an important part of the glutamate signaling pathway

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