Sandbox Reserved 1160

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 24: Line 24:
Important Amino Acids<ref name="Dore" />:
Important Amino Acids<ref name="Dore" />:
*<scene name='72/721531/Protien_bindtop/7'>Asparagine</scene> 747 forms a hydrogen bond network with the main chain carbonyl of Glycine 652 and the carbamate portion of mavoglurant.
*<scene name='72/721531/Protien_bindtop/7'>Asparagine</scene> 747 forms a hydrogen bond network with the main chain carbonyl of Glycine 652 and the carbamate portion of mavoglurant.
-
*Bicyclic ring of mavoglurant surrounded by <scene name='72/721531/Protien_hydrophobic/1'>hydrophobic binding pocket</scene>. Hydrophobic regions of the mGlu5 receptor are shown in <font color='purple'>'''purple'''</font> and the rest of the helices are shown in <font color='grey'>'''grey'''</font>. Mavoglurant is represented by spheres.
+
*Bicyclic ring of mavoglurant surrounded by <scene name='72/721531/Protien_hydrophobic/1'>hydrophobic binding pocket</scene>. <font color='purple'>'''Hydrophobic regions'''</font> of the mGlu5 receptor are shown in <font color='purple'>'''purple'''</font> and the <font color='grey'>'''rest of the helices'''</font> are shown in <font color='grey'>'''grey'''</font>. Mavoglurant is represented by spheres.
*2 Catalytic <scene name='72/721531/Protien_bindmiddle/4'>serine</scene> residues H-bond to the hydroxyl oxygen of our ligand.
*2 Catalytic <scene name='72/721531/Protien_bindmiddle/4'>serine</scene> residues H-bond to the hydroxyl oxygen of our ligand.
*A <scene name='72/721531/Protien_bindbottom/2'>water molecule</scene> inside of the binding pocket helps stabilize the inactive state.
*A <scene name='72/721531/Protien_bindbottom/2'>water molecule</scene> inside of the binding pocket helps stabilize the inactive state.

Revision as of 11:38, 19 April 2016

Human metabotropic glutamate receptor 5 transmembrane domain

Human metabotropic glutamate receptor 5 transmembrane domain bound to mavoglurant (PDB code of 4oo9). The 7 helices comprise the bulk of the protein structure. mGlu5 receptor is an important part of the glutamate signaling pathway

Drag the structure with the mouse to rotate
Personal tools