4yla

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4yla is ON HOLD until Paper Publication
+
==Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP==
 +
<StructureSection load='4yla' size='340' side='right' caption='[[4yla]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4yla]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YLA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YLA FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene>, <scene name='pdbligand=ILV:(2S,5S)-5-(HYDROXYMETHYL)-1-METHYL-2-(PROPAN-2-YL)-1,2,4,5,6,8-HEXAHYDRO-3H-[1,4]DIAZONINO[7,6,5-CD]INDOL-3-ONE'>ILV</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yl7|4yl7]]</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yla OCA], [http://pdbe.org/4yla PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yla RCSB], [http://www.ebi.ac.uk/pdbsum/4yla PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Prenylation reactions play crucial roles in controlling the activities of biomolecules. Bacterial prenyltransferases, TleC from Streptomyces blastmyceticus and MpnD from Marinactinospora thermotolerans, catalyse the 'reverse' prenylation of (-)-indolactam V at the C-7 position of the indole ring with geranyl pyrophosphate or dimethylallyl pyrophosphate, to produce lyngbyatoxin or pendolmycin, respectively. Using in vitro analyses, here we show that both TleC and MpnD exhibit relaxed substrate specificities and accept various chain lengths (C5-C25) of the prenyl donors. Comparisons of the crystal structures and their ternary complexes with (-)-indolactam V and dimethylallyl S-thiophosphate revealed the intimate structural details of the enzyme-catalysed 'reverse' prenylation reactions and identified the active-site residues governing the selection of the substrates. Furthermore, structure-based enzyme engineering successfully altered the preference for the prenyl chain length of the substrates, as well as the regio- and stereo-selectivities of the prenylation reactions, to produce a series of unnatural novel indolactams.
-
Authors: Mori, T., Morita, H., Abe, I.
+
Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.,Mori T, Zhang L, Awakawa T, Hoshino S, Okada M, Morita H, Abe I Nat Commun. 2016 Mar 8;7:10849. doi: 10.1038/ncomms10849. PMID:26952246<ref>PMID:26952246</ref>
-
Description: Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Mori, T]]
+
<div class="pdbe-citations 4yla" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Abe, I]]
[[Category: Abe, I]]
 +
[[Category: Mori, T]]
[[Category: Morita, H]]
[[Category: Morita, H]]
 +
[[Category: Indolactam v]]
 +
[[Category: Indole prenyltransferase]]
 +
[[Category: Pt-fold]]
 +
[[Category: Transferase]]

Revision as of 16:34, 10 May 2016

Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP

4yla, resolution 1.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools