1ixr

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|PDB= 1ixr |SIZE=350|CAPTION= <scene name='initialview01'>1ixr</scene>, resolution 3.3&Aring;
|PDB= 1ixr |SIZE=350|CAPTION= <scene name='initialview01'>1ixr</scene>, resolution 3.3&Aring;
|SITE=
|SITE=
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|LIGAND= <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER'>ANP</scene>
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|LIGAND= <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Adenosinetriphosphatase Adenosinetriphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.3 3.6.1.3]
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosinetriphosphatase Adenosinetriphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.3 3.6.1.3] </span>
|GENE= ruvA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus]), ruvB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])
|GENE= ruvA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus]), ruvB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])
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|DOMAIN=
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|RELATEDENTRY=[[1hqc|1HQC]], [[1ixs|1IXS]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ixr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ixr OCA], [http://www.ebi.ac.uk/pdbsum/1ixr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ixr RCSB]</span>
}}
}}
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[[Category: Tsuchiya, D.]]
[[Category: Tsuchiya, D.]]
[[Category: Yamada, K.]]
[[Category: Yamada, K.]]
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[[Category: ANP]]
 
[[Category: aaa-atpase domain]]
[[Category: aaa-atpase domain]]
[[Category: complex with nucleotide]]
[[Category: complex with nucleotide]]
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[[Category: octameric ruva]]
[[Category: octameric ruva]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 11:56:18 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:26:09 2008''

Revision as of 18:26, 30 March 2008

Image:1ixr.gif


PDB ID 1ixr

Drag the structure with the mouse to rotate
, resolution 3.3Å
Ligands:
Gene: ruvA (Thermus thermophilus), ruvB (Thermus thermophilus)
Activity: Adenosinetriphosphatase, with EC number 3.6.1.3
Related: 1HQC, 1IXS


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



RuvA-RuvB complex


Overview

We present the X-ray structure of the RuvA-RuvB complex, which plays a crucial role in ATP-dependent branch migration. Two RuvA tetramers form the symmetric and closed octameric shell, where four RuvA domain IIIs spring out in the two opposite directions to be individually caught by a single RuvB. The binding of domain III deforms the protruding beta hairpin in the N-terminal domain of RuvB and thereby appears to induce a functional and less symmetric RuvB hexameric ring. The model of the RuvA-RuvB junction DNA ternary complex, constructed by fitting the X-ray structure into the averaged electron microscopic images of the RuvA-RuvB junction, appears to be more compatible with the branch migration mode of a fixed RuvA-RuvB interaction than with a rotational interaction mode.

About this Structure

1IXR is a Protein complex structure of sequences from Thermus thermophilus. Full crystallographic information is available from OCA.

Reference

Crystal structure of the RuvA-RuvB complex: a structural basis for the Holliday junction migrating motor machinery., Yamada K, Miyata T, Tsuchiya D, Oyama T, Fujiwara Y, Ohnishi T, Iwasaki H, Shinagawa H, Ariyoshi M, Mayanagi K, Morikawa K, Mol Cell. 2002 Sep;10(3):671-81. PMID:12408833

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