5jvd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "5jvd" [edit=sysop:move=sysop])
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5jvd is ON HOLD
+
==Tubulin-TUB092 complex==
 +
<StructureSection load='5jvd' size='340' side='right' caption='[[5jvd]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5jvd]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JVD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JVD FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6NL:(2E)-3-(3-HYDROXY-4-METHOXYPHENYL)-1-(7-METHOXY-2H-1,3-BENZODIOXOL-5-YL)-2-METHYLPROP-2-EN-1-ONE'>6NL</scene>, <scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jvd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jvd OCA], [http://pdbe.org/5jvd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jvd RCSB], [http://www.ebi.ac.uk/pdbsum/5jvd PDBsum]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/TBA1B_BOVIN TBA1B_BOVIN]] Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. [[http://www.uniprot.org/uniprot/STMN4_RAT STMN4_RAT]] Exhibits microtubule-destabilizing activity.<ref>PMID:15039434</ref> <ref>PMID:12111843</ref> <ref>PMID:15014504</ref> [[http://www.uniprot.org/uniprot/TBB2B_BOVIN TBB2B_BOVIN]] Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
We investigated the microtubule-destabilizing, vascular-targeting, anti-tumor and anti-metastatic activities of a new series of chalcones, whose prototype compound is (E)-3-(3''-amino-4''-methoxyphenyl)-1-(5'-methoxy-3',4'-methylendioxyphenyl)-2-me thylprop-2-en-1-one (TUB091). X-ray crystallography showed that these chalcones bind to the colchicine site of tubulin and therefore prevent the curved-to-straight structural transition of tubulin, which is required for microtubule formation. Accordingly, TUB091 inhibited cancer and endothelial cell growth, induced G2/M phase arrest and apoptosis at 1-10 nM. In addition, TUB091 displayed vascular disrupting effects in vitro and in the chicken chorioallantoic membrane (CAM) assay at low nanomolar concentrations. A water-soluble L-Lys-L-Pro derivative of TUB091 (i.e. TUB099) showed potent antitumor activity in melanoma and breast cancer xenograft models by causing rapid intratumoral vascular shutdown and massive tumor necrosis. TUB099 also displayed anti-metastatic activity similar to that of combretastatin A4-phosphate. Our data indicate that this novel class of chalcones represents interesting lead molecules for the design of vascular disrupting agents (VDAs). Moreover, we provide evidence that our prodrug approach may be valuable for the development of anti-cancer drugs.
-
Authors: Canela, M.-D., Noppen, S., Bueno, O., Prota, A.E., Bargsten, K., Saez-Calvo, G., Jimeno, M.-L., Benkheil, M., Ribatti, D., Velazquez, S., Camarasa, M.-J., Diaz, J.F., Steinmetz, M.O., Priego, E.-M., Perez-Perez, M.-J., Liekens, S.
+
Antivascular and antitumor properties of the tubulin-binding chalcone TUB091.,Canela MD, Noppen S, Bueno O, Prota AE, Bargsten K, Saez-Calvo G, Jimeno ML, Benkheil M, Ribatti D, Velazquez S, Camarasa MJ, Diaz JF, Steinmetz MO, Priego EM, Perez-Perez MJ, Liekens S Oncotarget. 2016 May 20. doi: 10.18632/oncotarget.9527. PMID:27224920<ref>PMID:27224920</ref>
-
Description: Tubulin-TUB092 complex
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Noppen, S]]
+
<div class="pdbe-citations 5jvd" style="background-color:#fffaf0;"></div>
-
[[Category: Perez-Perez, M.-J]]
+
== References ==
-
[[Category: Prota, A.E]]
+
<references/>
-
[[Category: Canela, M.-D]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Bos taurus]]
[[Category: Bargsten, K]]
[[Category: Bargsten, K]]
-
[[Category: Liekens, S]]
+
[[Category: Benkheil, M]]
-
[[Category: Diaz, J.F]]
+
-
[[Category: Steinmetz, M.O]]
+
-
[[Category: Saez-Calvo, G]]
+
[[Category: Bueno, O]]
[[Category: Bueno, O]]
-
[[Category: Priego, E.-M]]
+
[[Category: Camarasa, M J]]
 +
[[Category: Canela, M D]]
 +
[[Category: Diaz, J F]]
 +
[[Category: Jimeno, M L]]
 +
[[Category: Liekens, S]]
 +
[[Category: Noppen, S]]
 +
[[Category: Perez-Perez, M J]]
 +
[[Category: Priego, E M]]
 +
[[Category: Prota, A E]]
[[Category: Ribatti, D]]
[[Category: Ribatti, D]]
-
[[Category: Benkheil, M]]
+
[[Category: Saez-Calvo, G]]
-
[[Category: Jimeno, M.-L]]
+
[[Category: Steinmetz, M O]]
-
[[Category: Camarasa, M.-J]]
+
[[Category: Velazquez, S]]
[[Category: Velazquez, S]]
 +
[[Category: Cell cycle]]
 +
[[Category: Cytoskeleton]]
 +
[[Category: Microtubule]]
 +
[[Category: Tubulin fold]]

Revision as of 15:28, 20 June 2016

Tubulin-TUB092 complex

5jvd, resolution 2.39Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools