Proline utilization A

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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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{{#tree:id=OrganizedByTopic|openlevels=0|
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*PutA
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**[[4nm9]] – GsPutA + FAD – ''Geobacter sulfurreducens'' <br />
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**[[4nma]] – GsPutA + FAD + tetrahydrofuran derivative <br />
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**[[2gpe]] – EcPutA DNA-binding domain <br />
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**[[2ay0]] – EcPutA DNA-binding domain (mutant)<br />
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**[[4q71]], [[4q72]], [[4q73]] – PutA (mutant) + FAD – ''Bradyrhizobium diazoefficiens''<br />
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**[[4h6r]] – DrPutA + FAD – ''Deinococcus radiodurans''<br />
-
[[4nm9]] – GsPutA + FAD – ''Geobacter sulfurreducens'' <br />
+
*PutA complex
-
[[4nma]] – GsPutA + FAD + tetrahydrofuran derivative <br />
+
 
-
[[4nmb]] – GsPutA + FAD + lactate <br />
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**[[4nmb]] – GsPutA + FAD + lactate <br />
-
[[4nmc]] – GsPutA + FAD + zwittergent <br />
+
**[[4nmc]] – GsPutA + FAD + zwittergent <br />
-
[[4nmd]] – GsPutA + FAD + dithionite <br />
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**[[4nmd]] – GsPutA + FAD + dithionite <br />
-
[[4nme]] – GsPutA + FAD + propargylglycine <br />
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**[[4nme]] – GsPutA + FAD + propargylglycine <br />
-
[[4nmf]] – GsPutA + FAD derivative + menadione bisulfite<br />
+
**[[4nmf]] – GsPutA + FAD derivative + menadione bisulfite<br />
-
[[1tiw]] – EcPutA PRODH domain + FAD + tetrahydrofuran derivative – ''Escherichia coli''<br />
+
**[[1tiw]] – EcPutA PRODH domain + FAD + tetrahydrofuran derivative – ''Escherichia coli''<br />
-
[[3e2r]], [[4jny]], [[4jnz]] – EcPutA PRODH domain (mutant) + FAD + tetrahydrofuran derivative <br />
+
**[[3e2r]], [[4jny]], [[4jnz]] – EcPutA PRODH domain (mutant) + FAD + tetrahydrofuran derivative <br />
-
[[1tj0]], [[1tj1]] – EcPutA PRODH domain + FAD + lactate<br />
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**[[1tj0]], [[1tj1]] – EcPutA PRODH domain + FAD + lactate<br />
-
[[1tj2]] – EcPutA PRODH domain + FAD + acetate<br />
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**[[1tj2]] – EcPutA PRODH domain + FAD + acetate<br />
-
[[2fzn]] – EcPutA PRODH domain + FAD + proline<br />
+
**[[2fzn]] – EcPutA PRODH domain + FAD + proline<br />
-
[[3e2q]], [[3e2s]] – EcPutA PRODH domain (mutant) + FAD + proline derivative<br />
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**[[3e2q]], [[3e2s]] – EcPutA PRODH domain (mutant) + FAD + proline derivative<br />
-
[[2fzm]] – EcPutA PRODH domain + FAD + SO2<br />
+
**[[2fzm]] – EcPutA PRODH domain + FAD + SO2<br />
-
[[3itg]] – EcPutA PRODH domain + FAD + propargylglycine <br />
+
**[[3itg]] – EcPutA PRODH domain + FAD + propargylglycine <br />
-
[[2gpe]] – EcPutA DNA-binding domain <br />
+
**[[2rbf]] – EcPutA DNA-binding domain + DNA<br />
-
[[2ay0]] – EcPutA DNA-binding domain (mutant)<br />
+
**[[4o8a]] – EcPutA DNA-binding + PRODH domains + FAD <br />
-
[[2rbf]] – EcPutA DNA-binding domain + DNA<br />
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**[[4h6q]] – DrPutA + FAD + THF <br />
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[[4o8a]] – EcPutA DNA-binding + PRODH domains + FAD <br />
+
}}
== References ==
== References ==
<references/>
<references/>

Revision as of 09:28, 12 July 2016

E. coli PutA proline dehydrogenase domain with cofactor FAD complex with hydroxyproline (PDB code 3e2q)

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3D Structures of proline utilization A

Updated on 12-July-2016

References

  1. ↑ Srivastava D, Zhu W, Johnson WH, Whitman CP, Becker DF, Tanner JJ. The Structure of the Proline Utilization A Proline Dehydrogenase Domain Inactivated by N-Propargylglycine Provides Insight into Conformational Changes Induced by Substrate Binding and Flavin Reduction (,). Biochemistry. 2009 Dec 29. PMID:19994913 doi:10.1021/bi901717s
  2. ↑ Ostrander EL, Larson JD, Schuermann JP, Tanner JJ. A Conserved Active Site Tyrosine Residue of Proline Dehydrogenase Helps Enforce the Preference for Proline over Hydroxyproline as the Substrate (dagger) (double dagger). Biochemistry. 2009 Feb 10;48(5):951-9. PMID:19140736 doi:10.1021/bi802094k

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Michal Harel, Alexander Berchansky, Joel L. Sussman

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