5d8c
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of HiNmlR, a MerR family regulator lacking the sensor domain, bound to promoter DNA== | |
+ | <StructureSection load='5d8c' size='340' side='right' caption='[[5d8c]], [[Resolution|resolution]] 2.25Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5d8c]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D8C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5D8C FirstGlance]. <br> | ||
+ | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5d8c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d8c OCA], [http://pdbe.org/5d8c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5d8c RCSB], [http://www.ebi.ac.uk/pdbsum/5d8c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5d8c ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Pathogenic bacteria such as Haemophilus influenzae, a major cause of lower respiratory tract diseases, must cope with a range of electrophiles generated in the host or by endogenous metabolism. Formaldehyde is one such compound that can irreversibly damage proteins and DNA through alkylation and cross-linking and interfere with redox homeostasis. Its detoxification operates under the control of HiNmlR, a protein from the MerR family that lacks a specific sensor region and does not bind metal ions. We demonstrate that HiNmlR is a thiol-dependent transcription factor that modulates H. influenzae response to formaldehyde, with two cysteine residues (Cys54 and Cys71) identified to be important for its response against a formaldehyde challenge. We obtained crystal structures of HiNmlR in both the DNA-free and two DNA-bound forms, which suggest that HiNmlR enhances target gene transcription by twisting of operator DNA sequences in a two-gene operon containing overlapping promoters. Our work provides the first structural insights into the mechanism of action of MerR regulators that lack sensor regions. | ||
- | + | Structural basis of thiol-based regulation of formaldehyde detoxification in H. influenzae by a MerR regulator with no sensor region.,Counago RM, Chen NH, Chang CW, Djoko KY, McEwan AG, Kobe B Nucleic Acids Res. 2016 Jun 15. pii: gkw543. PMID:27307602<ref>PMID:27307602</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 5d8c" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Chang, C W]] | ||
+ | [[Category: Chen, N H]] | ||
+ | [[Category: Counago, R M]] | ||
+ | [[Category: Djoko, K Y]] | ||
+ | [[Category: Kobe, B]] | ||
+ | [[Category: McEwan, A G]] | ||
+ | [[Category: Dna untwisting]] | ||
+ | [[Category: Merr]] | ||
+ | [[Category: Thiol-based genetic switch]] | ||
+ | [[Category: Transcription factor]] | ||
+ | [[Category: Transcription-dna complex]] |
Revision as of 10:20, 13 July 2016
Crystal structure of HiNmlR, a MerR family regulator lacking the sensor domain, bound to promoter DNA
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