This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5efj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5efj is ON HOLD until Paper Publication
+
==Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with HC toxin==
-
 
+
<StructureSection load='5efj' size='340' side='right' caption='[[5efj]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
-
Authors: Hai, Y., Christianson, D.W.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[5efj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Bipolaris_zeicola Bipolaris zeicola]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EFJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EFJ FirstGlance]. <br>
-
Description: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with HC toxin
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=5OM:(2S)-2-AMINO-8,8-DIHYDROXY-8-[(2S)-OXIRAN-2-YL]OCTANOIC+ACID'>5OM</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=DPR:D-PROLINE'>DPR</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5edu|5edu]], [[5eef|5eef]], [[5eei|5eei]], [[5eek|5eek]], [[5eem|5eem]], [[5een|5een]], [[5ef7|5ef7]], [[5ef8|5ef8]], [[5efb|5efb]], [[5efg|5efg]], [[5efh|5efh]], [[5efk|5efk]], [[5efn|5efn]]</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histone_deacetylase Histone deacetylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.98 3.5.1.98] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5efj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5efj OCA], [http://pdbe.org/5efj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5efj RCSB], [http://www.ebi.ac.uk/pdbsum/5efj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5efj ProSAT]</span></td></tr>
 +
</table>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bipolaris zeicola]]
 +
[[Category: Histone deacetylase]]
 +
[[Category: Christianson, D W]]
[[Category: Hai, Y]]
[[Category: Hai, Y]]
-
[[Category: Christianson, D.W]]
+
[[Category: Hydrolase-hydrolase inhibitor complex]]

Revision as of 15:38, 27 July 2016

Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with HC toxin

5efj, resolution 1.73Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools