1kog
From Proteopedia
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|PDB= 1kog |SIZE=350|CAPTION= <scene name='initialview01'>1kog</scene>, resolution 3.50Å | |PDB= 1kog |SIZE=350|CAPTION= <scene name='initialview01'>1kog</scene>, resolution 3.50Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=A:ADENOSINE-5'-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=C:CYTIDINE-5'-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=G:GUANOSINE-5'-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=TSB:5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE'>TSB</scene>, <scene name='pdbligand=U:URIDINE-5'-MONOPHOSPHATE'>U</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Threonine--tRNA_ligase Threonine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.3 6.1.1.3] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Threonine--tRNA_ligase Threonine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.3 6.1.1.3] </span> |
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[1evl|1EVL]], [[1qf6|1QF6]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kog OCA], [http://www.ebi.ac.uk/pdbsum/1kog PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1kog RCSB]</span> | ||
}} | }} | ||
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[[Category: Springer, M.]] | [[Category: Springer, M.]] | ||
[[Category: Torres-Larrios, A.]] | [[Category: Torres-Larrios, A.]] | ||
| - | [[Category: TSB]] | ||
| - | [[Category: ZN]] | ||
[[Category: protein-rna complex]] | [[Category: protein-rna complex]] | ||
[[Category: rna base triple]] | [[Category: rna base triple]] | ||
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[[Category: rna stem-loop]] | [[Category: rna stem-loop]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:51:26 2008'' |
Revision as of 18:51, 30 March 2008
| |||||||
| , resolution 3.50Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , , , , | ||||||
| Activity: | Threonine--tRNA ligase, with EC number 6.1.1.3 | ||||||
| Related: | 1EVL, 1QF6
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal structure of E. coli threonyl-tRNA synthetase interacting with the essential domain of its mRNA operator
Overview
Escherichia coli threonyl-tRNA synthetase (ThrRS) represses the translation of its own messenger RNA by binding to an operator located upstream of the initiation codon. The crystal structure of the complex between the core of ThrRS and the essential domain of the operator shows that the mRNA uses the recognition mode of the tRNA anticodon loop to initiate binding. The final positioning of the operator, upon which the control mechanism is based, relies on a characteristic RNA motif adapted to the enzyme surface. The finding of other thrS operators that have this conserved motif leads to a generalization of this regulatory mechanism to a subset of Gram-negative bacteria.
About this Structure
1KOG is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.
Reference
Structural basis of translational control by Escherichia coli threonyl tRNA synthetase., Torres-Larios A, Dock-Bregeon AC, Romby P, Rees B, Sankaranarayanan R, Caillet J, Springer M, Ehresmann C, Ehresmann B, Moras D, Nat Struct Biol. 2002 May;9(5):343-7. PMID:11953757
Page seeded by OCA on Sun Mar 30 21:51:26 2008
Categories: Escherichia coli | Single protein | Threonine--tRNA ligase | Caillet, J. | Dock-Bregeon, A C. | Ehresmann, B. | Ehresmann, C. | Moras, D. | Rees, B. | Romby, P. | Sankaranarayanan, R. | Springer, M. | Torres-Larrios, A. | Protein-rna complex | Rna base triple | Rna double helix | Rna stem-loop
