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3j6l

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Revision as of 19:44, 4 August 2016

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Structural highlights

3j6l is a 1 chain structure with sequence from Human. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Related:	3j6m, 3j6n, 3j6o
Gene:	CXADR, CAR (HUMAN)
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[CXAR_HUMAN] Component of the epithelial apical junction complex that is essential for the tight junction integrity. Proposed to function as a homophilic cell adhesion molecule. Recruits MPDZ to intercellular contact sites. Probably involved in transepithelial migration of polymorphonuclear leukocytes (PMN) through adhesive interactions with AMICA1/JAML located in the plasma membrane of PMN.^[1] ^[2] ^[3] ^[4]

Publication Abstract from PubMed

The coxsackievirus and adenovirus receptor (CAR) has been identified as the cellular receptor for group B coxsackieviruses, including serotype 3 (CVB3). CAR mediates infection by binding to CVB3 and catalyzing conformational changes in the virus that result in formation of the altered, non-infectious "A-particle". Kinetic analyses show that the apparent first-order rate constant for the inactivation of CVB3 by soluble CAR (sCAR) at physiological temperatures varies non-linearly with sCAR concentration. The cryo-electron microscopy (cryo-EM) reconstruction of the CVB3-CAR complex resulted in a 9.0 A resolution map that was interpreted with the four available crystal structures of CAR, providing a consensus footprint for the receptor-binding site. The analysis of the cryo-EM structure identifies important virus-receptor interactions that are conserved across picornavirus species. These conserved interactions map to variable antigenic sites or structurally conserved regions, suggesting a combination of evolutionary mechanisms for receptor site preservation. The CAR-catalyzed A-particle structure was solved to 6.6 A resolution and shows significant rearrangement of internal features and symmetric interactions with the RNA genome. STATEMENT OF IMPORTANCE: Our manuscript presents new information about receptor use by picornaviruses and highlights the importance of attaining at least approximately 9 A resolution for the interpretation of cryoEM complex maps. The analysis of receptor binding elucidates two complementary mechanisms for preservation of the low affinity (initial) interaction of receptor and defines the kinetics of receptor catalyzed conformational change to the A-particle.

Kinetic and structural analysis of coxsackievirus B3 receptor interactions and formation of the A-particle.,Organtini LJ, Makhov AM, Conway JF, Hafenstein S, Carson SD J Virol. 2014 Mar 12. PMID:24623425^[5]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Tomko RP, Xu R, Philipson L. HCAR and MCAR: the human and mouse cellular receptors for subgroup C adenoviruses and group B coxsackieviruses. Proc Natl Acad Sci U S A. 1997 Apr 1;94(7):3352-6. PMID:9096397
↑ Cohen CJ, Shieh JT, Pickles RJ, Okegawa T, Hsieh JT, Bergelson JM. The coxsackievirus and adenovirus receptor is a transmembrane component of the tight junction. Proc Natl Acad Sci U S A. 2001 Dec 18;98(26):15191-6. Epub 2001 Dec 4. PMID:11734628 doi:10.1073/pnas.261452898
↑ Walters RW, Freimuth P, Moninger TO, Ganske I, Zabner J, Welsh MJ. Adenovirus fiber disrupts CAR-mediated intercellular adhesion allowing virus escape. Cell. 2002 Sep 20;110(6):789-99. PMID:12297051
↑ Zen K, Liu Y, McCall IC, Wu T, Lee W, Babbin BA, Nusrat A, Parkos CA. Neutrophil migration across tight junctions is mediated by adhesive interactions between epithelial coxsackie and adenovirus receptor and a junctional adhesion molecule-like protein on neutrophils. Mol Biol Cell. 2005 Jun;16(6):2694-703. Epub 2005 Mar 30. PMID:15800062 doi:E05-01-0036
↑ Organtini LJ, Makhov AM, Conway JF, Hafenstein S, Carson SD. Kinetic and structural analysis of coxsackievirus B3 receptor interactions and formation of the A-particle. J Virol. 2014 Mar 12. PMID:24623425 doi:http://dx.doi.org/10.1128/JVI.00299-14

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3j6l"

@@ Line 1: / Line 1: @@
 ==Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle==
 <StructureSection load='3j6l' size='340' side='right' caption='[[3j6l]], [[Resolution|resolution]] 9.00&Aring;' scene=''>
@@ Line 6: / Line 7: @@
 <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3j6m|3j6m]], [[3j6n|3j6n]], [[3j6o|3j6o]]</td></tr>
 <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CXADR, CAR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3j6l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j6l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3j6l RCSB], [http://www.ebi.ac.uk/pdbsum/3j6l PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3j6l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j6l OCA], [http://pdbe.org/3j6l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3j6l RCSB], [http://www.ebi.ac.uk/pdbsum/3j6l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3j6l ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 18: / Line 19: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3j6l" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>

3j6l

From Proteopedia

Revision as of 19:44, 4 August 2016

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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