3gj4
From Proteopedia
(Difference between revisions)
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==Crystal structure of human RanGDP-Nup153ZnF3 complex== | ==Crystal structure of human RanGDP-Nup153ZnF3 complex== | ||
<StructureSection load='3gj4' size='340' side='right' caption='[[3gj4]], [[Resolution|resolution]] 2.15Å' scene=''> | <StructureSection load='3gj4' size='340' side='right' caption='[[3gj4]], [[Resolution|resolution]] 2.15Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3gj4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3gj4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GJ4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GJ4 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ch5|3ch5]], [[2gqe|2gqe]], [[1byu|1byu]], [[3gj0|3gj0]], [[3gj3|3gj3]], [[3gj5|3gj5]], [[3gj6|3gj6]], [[3gj7|3gj7]], [[3gj8|3gj8]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ch5|3ch5]], [[2gqe|2gqe]], [[1byu|1byu]], [[3gj0|3gj0]], [[3gj3|3gj3]], [[3gj5|3gj5]], [[3gj6|3gj6]], [[3gj7|3gj7]], [[3gj8|3gj8]]</td></tr> | ||
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RAN, ARA24, OK/SW-cl.81 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RAN, ARA24, OK/SW-cl.81 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), Nup153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gj4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gj4 RCSB], [http://www.ebi.ac.uk/pdbsum/3gj4 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gj4 OCA], [http://pdbe.org/3gj4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gj4 RCSB], [http://www.ebi.ac.uk/pdbsum/3gj4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gj4 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gj4 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 3gj4" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Buffalo rat]] |
- | [[Category: | + | [[Category: Human]] |
[[Category: Partridge, J R]] | [[Category: Partridge, J R]] | ||
[[Category: Schwartz, T U]] | [[Category: Schwartz, T U]] |
Revision as of 21:07, 4 August 2016
Crystal structure of human RanGDP-Nup153ZnF3 complex
|
Categories: Buffalo rat | Human | Partridge, J R | Schwartz, T U | Dna-binding | G protein | Gdp | Gtp-binding | Host-virus interaction | Isopeptide bond | Metal-binding | Mrna transport | Nuclear pore | Nuclear pore complex | Nucleotide-binding | Nucleus | Nup153 | Phosphoprotein | Protein transport | Ran | Translocation | Transport | Transport protein | Zinc finger | Zinc-finger