This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4fts
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of the N363T mutant of the Flock House virus capsid== | ==Crystal structure of the N363T mutant of the Flock House virus capsid== | ||
<StructureSection load='4fts' size='340' side='right' caption='[[4fts]], [[Resolution|resolution]] 3.20Å' scene=''> | <StructureSection load='4fts' size='340' side='right' caption='[[4fts]], [[Resolution|resolution]] 3.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4fts]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[4fts]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Fhv Fhv] and [http://en.wikipedia.org/wiki/Spodoptera_frugiperda Spodoptera frugiperda]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2q23 2q23]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FTS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FTS FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lob|3lob]], [[1nov|1nov]], [[2bbv|2bbv]], [[1f8v|1f8v]], [[4fsj|4fsj]], [[4ftb|4ftb]], [[4fte|4fte]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lob|3lob]], [[1nov|1nov]], [[2bbv|2bbv]], [[1f8v|1f8v]], [[4fsj|4fsj]], [[4ftb|4ftb]], [[4fte|4fte]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">alpha, coat protein alpha ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12287 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">alpha, coat protein alpha ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12287 FHV])</td></tr> |
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nodavirus_endopeptidase Nodavirus endopeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.44 3.4.23.44] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nodavirus_endopeptidase Nodavirus endopeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.44 3.4.23.44] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fts FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fts OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fts RCSB], [http://www.ebi.ac.uk/pdbsum/4fts PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fts FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fts OCA], [http://pdbe.org/4fts PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4fts RCSB], [http://www.ebi.ac.uk/pdbsum/4fts PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4fts ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 16: | Line 17: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Fhv]] |
[[Category: Nodavirus endopeptidase]] | [[Category: Nodavirus endopeptidase]] | ||
[[Category: Spodoptera frugiperda]] | [[Category: Spodoptera frugiperda]] | ||
| Line 27: | Line 28: | ||
[[Category: Beta-barrel]] | [[Category: Beta-barrel]] | ||
[[Category: Capsid protein]] | [[Category: Capsid protein]] | ||
| + | [[Category: Flock house virus]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Icosahedral virus]] | [[Category: Icosahedral virus]] | ||
Revision as of 00:18, 5 August 2016
Crystal structure of the N363T mutant of the Flock House virus capsid
| |||||||||||
