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3gfo
From Proteopedia
(Difference between revisions)
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==Structure of cbiO1 from clostridium perfringens: Part of the ABC transporter complex cbiONQ.== | ==Structure of cbiO1 from clostridium perfringens: Part of the ABC transporter complex cbiONQ.== | ||
<StructureSection load='3gfo' size='340' side='right' caption='[[3gfo]], [[Resolution|resolution]] 2.30Å' scene=''> | <StructureSection load='3gfo' size='340' side='right' caption='[[3gfo]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3gfo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3gfo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clop1 Clop1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GFO FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cbiO1, CPF_0188 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=195103 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cbiO1, CPF_0188 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=195103 CLOP1])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gfo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gfo RCSB], [http://www.ebi.ac.uk/pdbsum/3gfo PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3gfo TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gfo OCA], [http://pdbe.org/3gfo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gfo RCSB], [http://www.ebi.ac.uk/pdbsum/3gfo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gfo ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3gfo TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[http://www.uniprot.org/uniprot/ | + | [[http://www.uniprot.org/uniprot/ECFA3_CLOP1 ECFA3_CLOP1]] ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.[HAMAP-Rule:MF_01710] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gfo ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Clop1]] |
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
[[Category: Burley, S K]] | [[Category: Burley, S K]] | ||
Revision as of 01:32, 5 August 2016
Structure of cbiO1 from clostridium perfringens: Part of the ABC transporter complex cbiONQ.
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Categories: Clop1 | Almo, S C | Burley, S K | Dickey, M | Do, J | Morano, C | Structural genomic | Ramagopal, U A | Toro, R | Atp binding protein | Atp-binding | Cbio1 | Cell membrane | Cobalt | Cobalt import atp-binding protein cbio 1 | Cobalt transport | Hydrolase | Ion transport | Membrane | Nucleotide-binding | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Transport
