3wa7
From Proteopedia
(Difference between revisions)
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| - | {{STRUCTURE_3wa7| PDB=3wa7 | SCENE= }} | ||
| - | ===Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal=== | ||
| - | {{ABSTRACT_PUBMED_23836494}} | ||
| - | == | + | ==Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal== |
| - | [[3wa7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <StructureSection load='3wa7' size='340' side='right' caption='[[3wa7]], [[Resolution|resolution]] 1.70Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3wa7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"lactobacillus_arabinosus"_fred_et_al. "lactobacillus arabinosus" fred et al.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA7 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wa6|3wa6]]</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tannase Tannase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.20 3.1.1.20] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa7 OCA], [http://pdbe.org/3wa7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wa7 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wa7 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Tannin acylhydrolase (EC 3.1.1.20) referred commonly as tannase catalyzes the hydrolysis of the galloyl ester bond of tannins to release gallic acid. Although the enzyme is useful for various industries, the tertiary structure is not yet determined. In this study, we determined the crystal structure of tannase produced by Lactobacillus plantarum. The tannase structure belongs to a member of alpha/beta-hydrolase superfamily with an additional "lid" domain. A glycerol molecule derived from cryoprotectant solution was accommodated into the tannase active site. The binding manner of glycerol to tannase seems to be similar to that of the galloyl moiety in the substrate. (c) Proteins 2013;. (c) 2013 Wiley Periodicals, Inc. | ||
| - | + | Crystallographic and mutational analyses of tannase from Lactobacillus plantarum.,Matoba Y, Tanaka N, Noda M, Higashikawa F, Kumagai T, Sugiyama M Proteins. 2013 Jul 8. doi: 10.1002/prot.24355. PMID:23836494<ref>PMID:23836494</ref> | |
| - | <ref | + | |
| - | [[Category: | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| + | </div> | ||
| + | <div class="pdbe-citations 3wa7" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Lactobacillus arabinosus fred et al]] | ||
[[Category: Tannase]] | [[Category: Tannase]] | ||
| - | [[Category: Matoba, Y | + | [[Category: Matoba, Y]] |
| - | [[Category: Sugiyama, M | + | [[Category: Sugiyama, M]] |
| - | [[Category: Tanaka, N | + | [[Category: Tanaka, N]] |
[[Category: Alpha/beta-hydrolase]] | [[Category: Alpha/beta-hydrolase]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
Revision as of 08:59, 5 August 2016
Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
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