4g3m
From Proteopedia
(Difference between revisions)
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==Complex Structure of Bacillus subtilis RibG: The Deamination Process in Riboflavin Biosynthesis== | ==Complex Structure of Bacillus subtilis RibG: The Deamination Process in Riboflavin Biosynthesis== | ||
<StructureSection load='4g3m' size='340' side='right' caption='[[4g3m]], [[Resolution|resolution]] 2.56Å' scene=''> | <StructureSection load='4g3m' size='340' side='right' caption='[[4g3m]], [[Resolution|resolution]] 2.56Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4g3m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[4g3m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G3M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4G3M FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AI9:[(2R,3S,4S,5E)-5-[[5-AZANYL-2,4-BIS(OXIDANYLIDENE)-1H-PYRIMIDIN-6-YL]IMINO]-2,3,4-TRIS(OXIDANYL)PENTYL]+DIHYDROGEN+PHOSPHATE'>AI9</scene>, <scene name='pdbligand=AOF:N-(5-AMINO-2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)-5-O-PHOSPHONO-BETA-D-RIBOFURANOSYLAMINE'>AOF</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AI9:[(2R,3S,4S,5E)-5-[[5-AZANYL-2,4-BIS(OXIDANYLIDENE)-1H-PYRIMIDIN-6-YL]IMINO]-2,3,4-TRIS(OXIDANYL)PENTYL]+DIHYDROGEN+PHOSPHATE'>AI9</scene>, <scene name='pdbligand=AOF:N-(5-AMINO-2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)-5-O-PHOSPHONO-BETA-D-RIBOFURANOSYLAMINE'>AOF</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2b3z|2b3z]], [[3ex8|3ex8]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2b3z|2b3z]], [[3ex8|3ex8]]</td></tr> | ||
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU23280, ribD, ribG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU23280, ribD, ribG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4g3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g3m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4g3m RCSB], [http://www.ebi.ac.uk/pdbsum/4g3m PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4g3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g3m OCA], [http://pdbe.org/4g3m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4g3m RCSB], [http://www.ebi.ac.uk/pdbsum/4g3m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4g3m ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 4g3m" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Bacsu]] |
[[Category: Chang, T H]] | [[Category: Chang, T H]] | ||
[[Category: Chen, S C]] | [[Category: Chen, S C]] |
Revision as of 09:49, 5 August 2016
Complex Structure of Bacillus subtilis RibG: The Deamination Process in Riboflavin Biosynthesis
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Categories: Bacsu | Chang, T H | Chen, S C | Lai, W L | Liaw, S H | Shen, C Y | Yen, T M | Yu, H C | Alpha/beta/alpha | Deaminase domain | Hydrolase | Oxidoreductase | Reductase domain