This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4fr1
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==tRNA-Guanine Transglycosylase cocrystallized with alkine-substituted lin-benzoguanine ligand== | ==tRNA-Guanine Transglycosylase cocrystallized with alkine-substituted lin-benzoguanine ligand== | ||
<StructureSection load='4fr1' size='340' side='right' caption='[[4fr1]], [[Resolution|resolution]] 1.74Å' scene=''> | <StructureSection load='4fr1' size='340' side='right' caption='[[4fr1]], [[Resolution|resolution]] 1.74Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4fr1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[4fr1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Zymmo Zymmo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FR1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FR1 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=0V2:6-AMINO-4-[2-({[TRANS-4-(BIPHENYL-4-YLETHYNYL)CYCLOHEXYL]METHYL}AMINO)ETHYL]-2-(METHYLAMINO)-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE'>0V2</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=0V2:6-AMINO-4-[2-({[TRANS-4-(BIPHENYL-4-YLETHYNYL)CYCLOHEXYL]METHYL}AMINO)ETHYL]-2-(METHYLAMINO)-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE'>0V2</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4fps|4fps]], [[3eos|3eos]], [[3s1g|3s1g]], [[3v0y|3v0y]], [[4fr6|4fr6]], [[4fsa|4fsa]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4fps|4fps]], [[3eos|3eos]], [[3s1g|3s1g]], [[3v0y|3v0y]], [[4fr6|4fr6]], [[4fsa|4fsa]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tgt, ZMO0363 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264203 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tgt, ZMO0363 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264203 ZYMMO])</td></tr> |
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA-guanine(34)_transglycosylase tRNA-guanine(34) transglycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.29 2.4.2.29] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA-guanine(34)_transglycosylase tRNA-guanine(34) transglycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.29 2.4.2.29] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fr1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fr1 RCSB], [http://www.ebi.ac.uk/pdbsum/4fr1 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fr1 OCA], [http://pdbe.org/4fr1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4fr1 RCSB], [http://www.ebi.ac.uk/pdbsum/4fr1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4fr1 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 16: | Line 17: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Zymmo]] |
[[Category: Immekus, F]] | [[Category: Immekus, F]] | ||
[[Category: Klebe, G]] | [[Category: Klebe, G]] | ||
Revision as of 09:52, 5 August 2016
tRNA-Guanine Transglycosylase cocrystallized with alkine-substituted lin-benzoguanine ligand
| |||||||||||
