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3ld4
From Proteopedia
(Difference between revisions)
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==Urate oxidase complexed with 8-nitro xanthine== | ==Urate oxidase complexed with 8-nitro xanthine== | ||
<StructureSection load='3ld4' size='340' side='right' caption='[[3ld4]], [[Resolution|resolution]] 1.35Å' scene=''> | <StructureSection load='3ld4' size='340' side='right' caption='[[3ld4]], [[Resolution|resolution]] 1.35Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ld4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3ld4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspfl Aspfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LD4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LD4 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8NX:8-NITRO-3,7-DIHYDRO-1H-PURINE-2,6-DIONE'>8NX</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8NX:8-NITRO-3,7-DIHYDRO-1H-PURINE-2,6-DIONE'>8NX</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1r51|1r51]], [[3l8w|3l8w]], [[3l9g|3l9g]], [[3lbg|3lbg]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1r51|1r51]], [[3l8w|3l8w]], [[3l9g|3l9g]], [[3lbg|3lbg]]</td></tr> | ||
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Factor_independent_urate_hydroxylase Factor independent urate hydroxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.3.3 1.7.3.3] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ld4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ld4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ld4 RCSB], [http://www.ebi.ac.uk/pdbsum/3ld4 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ld4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ld4 OCA], [http://pdbe.org/3ld4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ld4 RCSB], [http://www.ebi.ac.uk/pdbsum/3ld4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ld4 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ld4 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3ld4" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Aspfl]] |
| - | [[Category: | + | [[Category: Factor independent urate hydroxylase]] |
[[Category: Gabison, L]] | [[Category: Gabison, L]] | ||
[[Category: H, N Colloc]] | [[Category: H, N Colloc]] | ||
[[Category: Prange, T]] | [[Category: Prange, T]] | ||
| + | [[Category: Aspergillus flavus]] | ||
[[Category: Nitroxanthine]] | [[Category: Nitroxanthine]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
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[[Category: Purine metabolism]] | [[Category: Purine metabolism]] | ||
[[Category: Thioxanthine]] | [[Category: Thioxanthine]] | ||
| + | [[Category: Urate oxidase]] | ||
[[Category: Xanthine]] | [[Category: Xanthine]] | ||
Revision as of 15:55, 5 August 2016
Urate oxidase complexed with 8-nitro xanthine
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