3dfh
From Proteopedia
(Difference between revisions)
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==crystal structure of putative mandelate racemase / muconate lactonizing enzyme from Vibrionales bacterium SWAT-3== | ==crystal structure of putative mandelate racemase / muconate lactonizing enzyme from Vibrionales bacterium SWAT-3== | ||
<StructureSection load='3dfh' size='340' side='right' caption='[[3dfh]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='3dfh' size='340' side='right' caption='[[3dfh]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VSWAT3_13707 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=391574 Vibrionales bacterium SWAT-3])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VSWAT3_13707 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=391574 Vibrionales bacterium SWAT-3])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dfh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dfh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dfh RCSB], [http://www.ebi.ac.uk/pdbsum/3dfh PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dfh TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dfh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dfh OCA], [http://pdbe.org/3dfh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dfh RCSB], [http://www.ebi.ac.uk/pdbsum/3dfh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dfh ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3dfh TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[http://www.uniprot.org/uniprot/ | + | [[http://www.uniprot.org/uniprot/IMAND_VIBBS IMAND_VIBBS]] Has no detectable activity with D-mannonate and with a panel of 70 other acid sugars (in vitro), in spite of the conservation of the residues that are expected to be important for catalytic activity and cofactor binding. May have evolved a divergent function.<ref>PMID:24697546</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dfh ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
Revision as of 16:08, 5 August 2016
crystal structure of putative mandelate racemase / muconate lactonizing enzyme from Vibrionales bacterium SWAT-3
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Categories: Vibrionales bacterium swat-3 | Almo, S C | Burley, S K | Malashkevich, V N | Meyer, A J | Structural genomic | Sauder, J M | Toro, R | Wasserman, S R | Isomerase | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Putative mandelate racemase / muconate lactonizing enzyme
