This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cff

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
 +
==Photoswitchable red fluorescent protein psRFP, on-state==
==Photoswitchable red fluorescent protein psRFP, on-state==
<StructureSection load='3cff' size='340' side='right' caption='[[3cff]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3cff' size='340' side='right' caption='[[3cff]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3cff]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Anemonia_sulcata Anemonia sulcata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CFF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3cff]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Anesu Anesu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CFF FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3cfa|3cfa]], [[3cfh|3cfh]], [[2a50|2a50]], [[1xqm|1xqm]], [[1xmz|1xmz]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3cfa|3cfa]], [[3cfh|3cfh]], [[2a50|2a50]], [[1xqm|1xqm]], [[1xmz|1xmz]]</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cff OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cff RCSB], [http://www.ebi.ac.uk/pdbsum/3cff PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cff OCA], [http://pdbe.org/3cff PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cff RCSB], [http://www.ebi.ac.uk/pdbsum/3cff PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3cff ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 15: Line 16:
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cff ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Anemonia sulcata]]
+
[[Category: Anesu]]
[[Category: Bartunik, H D]]
[[Category: Bartunik, H D]]
[[Category: Gundel, S]]
[[Category: Gundel, S]]

Revision as of 11:50, 11 August 2016

Photoswitchable red fluorescent protein psRFP, on-state

3cff, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools