3ahe
From Proteopedia
(Difference between revisions)
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==Phosphoketolase from Bifidobacterium Breve complexed with dihydroxyethyl thiamine diphosphate== | ==Phosphoketolase from Bifidobacterium Breve complexed with dihydroxyethyl thiamine diphosphate== | ||
<StructureSection load='3ahe' size='340' side='right' caption='[[3ahe]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='3ahe' size='340' side='right' caption='[[3ahe]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3ahe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3ahe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bifidobacterium_parvulorum"_reuter_1963 "bifidobacterium parvulorum" reuter 1963]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AHE FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2PE:NONAETHYLENE+GLYCOL'>2PE</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=THD:2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL+TRIHYDROGEN+DIPHOSPHATE'>THD</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2PE:NONAETHYLENE+GLYCOL'>2PE</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=THD:2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL+TRIHYDROGEN+DIPHOSPHATE'>THD</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ahc|3ahc]], [[3ahd|3ahd]], [[3ahf|3ahf]], [[3ahg|3ahg]], [[3ahh|3ahh]], [[3ahi|3ahi]], [[3ahj|3ahj]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ahc|3ahc]], [[3ahd|3ahd]], [[3ahf|3ahf]], [[3ahg|3ahg]], [[3ahh|3ahh]], [[3ahi|3ahi]], [[3ahj|3ahj]]</td></tr> | ||
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xfp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1685 Bifidobacterium | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xfp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1685 "Bifidobacterium parvulorum" Reuter 1963])</td></tr> |
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-6-phosphate_phosphoketolase Fructose-6-phosphate phosphoketolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.22 4.1.2.22] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-6-phosphate_phosphoketolase Fructose-6-phosphate phosphoketolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.22 4.1.2.22] </span></td></tr> | ||
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ahe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ahe RCSB], [http://www.ebi.ac.uk/pdbsum/3ahe PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ahe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahe OCA], [http://pdbe.org/3ahe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ahe RCSB], [http://www.ebi.ac.uk/pdbsum/3ahe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahe ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ahe ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 3ahe" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Bifidobacterium | + | [[Category: Bifidobacterium parvulorum reuter 1963]] |
[[Category: Fructose-6-phosphate phosphoketolase]] | [[Category: Fructose-6-phosphate phosphoketolase]] | ||
[[Category: Ashida, H]] | [[Category: Ashida, H]] |
Revision as of 18:09, 11 August 2016
Phosphoketolase from Bifidobacterium Breve complexed with dihydroxyethyl thiamine diphosphate
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Categories: Bifidobacterium parvulorum reuter 1963 | Fructose-6-phosphate phosphoketolase | Ashida, H | Fushinobu, S | Katayama, T | Kim, B J | Shoun, H | Suzuki, R | Wakagi, T | Yamamoto, K | Alpha-beta fold | Dihydroxyethyl thiamine diphosphate | Homodimer | Lyase | Thiamine diphosphate-dependent enzyme