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3d53
From Proteopedia
(Difference between revisions)
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==2.2 A crystal structure of inorganic pyrophosphatase from Rickettsia prowazekii== | ==2.2 A crystal structure of inorganic pyrophosphatase from Rickettsia prowazekii== | ||
<StructureSection load='3d53' size='340' side='right' caption='[[3d53]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='3d53' size='340' side='right' caption='[[3d53]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3d53]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3d53]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Ricpr Ricpr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D53 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D53 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ppa, RP589 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id= | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ppa, RP589 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272947 RICPR])</td></tr> |
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Inorganic_diphosphatase Inorganic diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.1 3.6.1.1] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Inorganic_diphosphatase Inorganic diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.1 3.6.1.1] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d53 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d53 RCSB], [http://www.ebi.ac.uk/pdbsum/3d53 PDBsum], [http://www.topsan.org/Proteins/SSGCID/3d53 TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d53 OCA], [http://pdbe.org/3d53 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3d53 RCSB], [http://www.ebi.ac.uk/pdbsum/3d53 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3d53 ProSAT], [http://www.topsan.org/Proteins/SSGCID/3d53 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d53 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Inorganic diphosphatase]] | [[Category: Inorganic diphosphatase]] | ||
| - | [[Category: | + | [[Category: Ricpr]] |
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
Revision as of 19:09, 11 August 2016
2.2 A crystal structure of inorganic pyrophosphatase from Rickettsia prowazekii
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