Transcription initiation factor

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 17: Line 17:
**[[1ytf]], [[1nh2]], [[1rm1]] – yTFIIA + TBP + DNA – yeast<br />
**[[1ytf]], [[1nh2]], [[1rm1]] – yTFIIA + TBP + DNA – yeast<br />
 +
**[[5fur]] – yTFIIA + yTFIIF + TATA-binding protein + DNA - CryoEM<br />
**[[1nvp]] – hTFIIA + TATA-binding protein + DNA – human<br />
**[[1nvp]] – hTFIIA + TATA-binding protein + DNA – human<br />
Line 26: Line 27:
**[[1rly]] - hTFIIB Zn ribbon domain + Zn – NMR<br />
**[[1rly]] - hTFIIB Zn ribbon domain + Zn – NMR<br />
**[[1ro4]] - hTFIIB Zn ribbon domain – NMR<br />
**[[1ro4]] - hTFIIB Zn ribbon domain – NMR<br />
-
**[[1vol]], [[1c9b]] – hTFIIB + TBP + DNA<BR />
 
-
**[[3k1f]], [[3k7a]], [[4bbr]], [[4bbs]] – yTFIIB + RNA polymerase II<br />
 
-
**[[4v1o]], [[4v1n]] – yTFIIB + yTFIIF + RNA polymerase II – Cryo EM<br />
 
**[[1ais]], [[1d3u]] - TFIIB C terminal + TBP + DNA – ''Pyrococcus woesei''
**[[1ais]], [[1d3u]] - TFIIB C terminal + TBP + DNA – ''Pyrococcus woesei''
 +
 +
*TFIIIB
 +
**[[4roc]], [[4rod]], [[4roe]] – hTFIIIB + TATA-binding protein + DNA <br />
*TFIID
*TFIID
Line 35: Line 36:
**[[1bh8]] – hTFIID<BR />
**[[1bh8]] – hTFIID<BR />
**[[1eqf]] – hTFIID subunit 1<br />
**[[1eqf]] – hTFIID subunit 1<br />
-
**[[3uv5]], [[3uv4]] – hTFIID subunit 1 bromodomain <br />
+
**[[3uv5]] – hTFIID subunit 1 bromodomain 1-2<br />
-
**[[3aad]] – hTFIID subunit 1 bromodomain + histone chaperone ASF1A<br />
+
**[[3uv4]] – hTFIID subunit 1 bromodomain 2<br />
 +
**[[3aad]] – hTFIID subunit 1 bromodomain 1-2 + histone chaperone ASF1A<br />
 +
**[[4yym]], [[4yyn]] – hTFIID subunit 1 bromodomain 2 + histone peptide<br />
 +
**[[5c13]] – hTFIID subunit 3 + histone peptide<br />
 +
**[[5i1q]], [[5i29]] – hTFIID subunit 1 bromodomain 2 + pyrrolopyridone<br />
 +
**[[5eg2]] - hTFIID subunit 10 + SETD7 + SAH<br />
**[[4wv4]] - hTFIID subunits 8+10 <br />
**[[4wv4]] - hTFIID subunits 8+10 <br />
**[[4grw]] - hTFIID subunits 1+7 <br />
**[[4grw]] - hTFIID subunits 1+7 <br />
**[[4oy2]] - yTFIID subunits 1+7 <br />
**[[4oy2]] - yTFIID subunits 1+7 <br />
 +
**[[5iok]], [[5o7e]] – yTFIID subunit 14 + histone peptide<br />
**[[1tba]] – TFIID – ''Drosophila melanogaster'' - NMR<BR />
**[[1tba]] – TFIID – ''Drosophila melanogaster'' - NMR<BR />
**[[1bh9]] – hTFIID + PCMBS<BR />
**[[1bh9]] – hTFIID + PCMBS<BR />
Line 58: Line 65:
**[[1onv]] – hTFIIF C terminal + serine phosphatase peptide - NMR<br />
**[[1onv]] – hTFIIF C terminal + serine phosphatase peptide - NMR<br />
**[[2k7l]] – hTFIIF C terminal + FCP1 peptide - NMR<br />
**[[2k7l]] – hTFIIF C terminal + FCP1 peptide - NMR<br />
 +
 +
*TF in RNA polymerase II
 +
 +
**[[5fyw]] – yTFIIA + yTFIIE + yTFIIF + DNA <br />
 +
**[[5fz5]] – yTFIIA + yTFIIE + yTFIIF + DNA – Cryo EM<br />
 +
**[[4v1o]], [[4v1n]] – yTFIIB + yTFIIF – Cryo EM<br />
 +
**[[3k1f]], [[3k7a]], [[4bbr]], [[4bbs]] – yTFIIB <br />
 +
**[[5iy6]], [[5iy7]], [[5iy8]], [[5iy9]], [[5iya]], [[5iyb]], [[5iyc]], [[5iyd]] – hTFIIA + hTFIIB + hTFIIE + hTFIIF + hTFIIH + DNA – Cryo EM<br />
 +
**[[5fmf]] – yTFIIA + yTFIIB + yTFIIE + yTFIIF + yTFIIH + DNA – Cryo EM<br />
 +
 +
*TF RRN3
 +
 +
**[[5g5l]] – yTF RRN3 in RNA polymerase I<br />
 +
}}
}}

Revision as of 09:55, 20 September 2016

Structure of human TFIIB (grey) complex with TATA-binding protein (green) and DNA (PDB entry 1vol)

Drag the structure with the mouse to rotate

3D structures of transcription initiation factors

Updated on 20-September-2016

References

  1. ↑ Roeder RG. The role of general initiation factors in transcription by RNA polymerase II. Trends Biochem Sci. 1996 Sep;21(9):327-35. PMID:8870495
  2. ↑ Kuhlman TC, Cho H, Reinberg D, Hernandez N. The general transcription factors IIA, IIB, IIF, and IIE are required for RNA polymerase II transcription from the human U1 small nuclear RNA promoter. Mol Cell Biol. 1999 Mar;19(3):2130-41. PMID:10022900
  3. ↑ Ha I, Lane WS, Reinberg D. Cloning of a human gene encoding the general transcription initiation factor IIB. Nature. 1991 Aug 22;352(6337):689-95. PMID:1876184 doi:http://dx.doi.org/10.1038/352689a0
  4. ↑ Peterson MG, Inostroza J, Maxon ME, Flores O, Admon A, Reinberg D, Tjian R. Structure and functional properties of human general transcription factor IIE. Nature. 1991 Dec 5;354(6352):369-73. PMID:1956398 doi:http://dx.doi.org/10.1038/354369a0

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Retrieved from "http://52.214.119.220/wiki/index.php/Transcription_initiation_factor"
Personal tools